Evidence map›Paper›PMID 28827596›Full record

ArticleNature communications2017

Live-cell p53 single-molecule binding is modulated by C-terminal acetylation and correlates with transcriptional activity.

Alessia Loffreda, Emanuela Jacchetti, Sofia Antunes, Paolo Rainone, Tiziana Daniele, Tatsuya Morisaki, Marco E Bianchi, Carlo Tacchetti, Davide Mazza

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alessia LoffredaIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy.
Emanuela JacchettiIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy.
Sofia AntunesIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy.
Paolo RainoneIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy.
Tiziana DanieleIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy.
Tatsuya MorisakiFluorescence Imaging Group, National Cancer Institute, NIH, Bethesda, Maryland, 20892, USA.ORCID http://orcid.org/0000-0001-7401-4673
Marco E BianchiIstituto Scientifico Ospedale San Raffaele, Chromatin Dynamics Unit, Milano, 20132, Italy.
Carlo TacchettiIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy. tacchetti.carlo@hsr.it.
Davide MazzaIstituto Scientifico Ospedale San Raffaele, Centro di Imaging Sperimentale, Milano, 20132, Italy. mazza.davide@hsr.it.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Live-cell microscopy has highlighted that transcription factors bind transiently to chromatin but it is not clear if the duration of these binding interactions can be modulated in response to an activation stimulus, and if such modulation can be controlled by post-translational modifications of the transcription factor. We address this question for the tumor suppressor p53 by combining live-cell single-molecule microscopy and single cell in situ measurements of transcription and we show that p53-binding kinetics are modulated following genotoxic stress. The modulation of p53 residence times on chromatin requires C-terminal acetylation-a classical mark for transcriptionally active p53-and correlates with the induction of transcription of target genes such as CDKN1a. We propose a model in which the modification state of the transcription factor determines the coupling between transcription factor abundance and transcriptional activity by tuning the transcription factor residence time on target sites.Both transcription binding kinetics and post-translational modifications of transcription factors are thought to play a role in the modulation of transcription. Here the authors use single-molecule tracking to directly demonstrate that p53 acetylation modulates promoter residence time and transcriptional activity.

Indexed as

Transcription, GeneticAcetylationCell Line, TumorCell TrackingChromatinCyclin-Dependent Kinase Inhibitor p21HumansMCF-7 CellsMicroscopy, ConfocalPromoter Regions, GeneticProtein BindingTime FactorsTranscription FactorsTumor Suppressor Protein p53ChromatinCyclin-Dependent Kinase Inhibitor p21Transcription FactorsTumor Suppressor Protein p53

Identifiers

PMID28827596
PMCPMC5567047

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.