ArticlePlant physiology2017
TransDetect Identifies a New Regulatory Module Controlling Phosphate Accumulation.
Article in Plant physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- The PHO1 protein family in phosphate export and beyond.Plant physiology · 2026Review
- bHLH35 mediates specificity in plant responses to multiple stress conditions.Science advances · 2025Article
- Synergistic Effects of Nitrogen and Zinc Foliar Application on Yield and Nutrient Accumulation in Rice at Various Growth Stages.Plants (Basel, Switzerland) · 2024Article
- The Deep Learning-Crop Platform (DL-CRoP): For Species-Level Identification and Nutrient Status of Agricultural Crops.Research (Washington, D.C.) · 2024Article
- PUB25 and PUB26 dynamically modulate ICE1 stability via differential ubiquitination during cold stress in Arabidopsis.The Plant cell · 2023Article
- Exploring Transcriptional Regulation of Hyperaccumulation inInternational journal of molecular sciences · 2023Article
- Towards a Discovery of a Zinc-Dependent Phosphate Transport Road in Plants.Plants (Basel, Switzerland) · 2022Article
- A tale of two players: the role of phosphate in iron and zinc homeostatic interactions.Planta · 2022Review
- Recent trends in root phenomics of plant systems with available methods- discrepancies and consonances.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022Review
- Induction of PrMADS10 on the lower side of bent pine tree stems: potential role in modifying plant cell wall properties and wood anatomy.Scientific reports · 2019Article
- Specificity of MYB interactions relies on motifs in ordered and disordered contexts.Nucleic acids research · 2019Article
- Identification of Molecular Integrators Shows that Nitrogen Actively Controls the Phosphate Starvation Response in Plants.The Plant cell · 2019Article
- Natural allelic variation of the AZI1 gene controls root growth under zinc-limiting condition.PLoS genetics · 2018Article
- Individual versus Combinatorial Effects of Silicon, Phosphate, and Iron Deficiency on the Growth of Lowland and Upland Rice Varieties.International journal of molecular sciences · 2018Article
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Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Identifying transcription factor (TFs) cooperation controlling target gene expression is still an arduous challenge. The accuracy of current methods at genome scale significantly drops with the increase in number of genes, which limits their applicability to more complex genomes, like animals and plants. Here, we developed an algorithm, TransDetect, able to predict TF combinations controlling the expression level of a given gene. TransDetect was used to identify novel TF modules regulating the expression of Arabidopsis (
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Registered trials
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