Evidence map›Paper›PMID 28825309›Full record

ArticleBrain connectivity2017

Distributed Intrinsic Functional Connectivity Patterns Predict Diagnostic Status in Large Autism Cohort.

Afrooz Jahedi, Chanond A Nasamran, Brian Faires, Juanjuan Fan, Ralph-Axel Müller

Open access · greenAbstract read
In one paragraph

Article in Brain connectivity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 3 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 3 syntheses or guidelines pooled it, 39 citations in OpenAlex.

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  13. Classification of Autism Spectrum Disorder Using rs-fMRI data and Graph Convolutional Networks.Proceedings : ... IEEE International Conference on Big Data. IEEE International Conference on Big Data · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Afrooz Jahedi1 Brain Development Imaging Laboratories, Department of Psychology, San Diego State University , San Diego, California.
Chanond A Nasamran1 Brain Development Imaging Laboratories, Department of Psychology, San Diego State University , San Diego, California.
Brian Faires1 Brain Development Imaging Laboratories, Department of Psychology, San Diego State University , San Diego, California.
Juanjuan Fan3 Department of Mathematics and Statistics, San Diego State University , San Diego, California.
Ralph-Axel Müller1 Brain Development Imaging Laboratories, Department of Psychology, San Diego State University , San Diego, California.
San Diego State University · US

Funding

Integrity and Dynamic Processing Efficiency of Networks in ASDR01MH101173 · NIMH · SAN DIEGO STATE UNIVERSITY · PI MUELLER, RALPH-AXEL · 2014 to 2018
$3.2M
Linking Local Activity and Functional Connectivity in AutismR01MH081023 · NIMH · SAN DIEGO STATE UNIVERSITY · PI MUELLER, RALPH-AXEL · 2009 to 2013
$1.9M
Multimodal Imaging of Social Brain Networks in ASDK01MH097972 · NIMH · SAN DIEGO STATE UNIVERSITY · PI FISHMAN, INNA · 2012 to 2015
$599k
NIMH NIH HHS K01 MH097972NIMH NIH HHS R01 MH081023NIMH NIH HHS R01 MH101173
6 · The paper itself

Abstract

Diagnosis of autism spectrum disorder (ASD) currently relies on behavioral observations because brain markers are unknown. Machine learning approaches can identify patterns in imaging data that predict diagnostic status, but most studies using functional connectivity MRI (fcMRI) data achieved only modest accuracies of 60-80%. We used conditional random forest (CRF), an ensemble learning technique protected against bias from feature correlation (which exists in fcMRI matrices). We selected 252 low-motion resting-state functional MRI scans from the Autism Brain Imaging Data Exchange, including 126 typically developing (TD) and 126 ASD participants, matched for age, nonverbal IQ, and head motion. A matrix of functional connectivities between 220 functionally defined regions of interest was used for diagnostic classification. In several runs, we achieved accuracies of 92-99% for classifiers with >300 features (most informative connections). Features, including pericentral somatosensory and motor regions, were disproportionately informative. Findings differed partially from a previous study in the same sample that used feature selection with random forest (which is biased by feature correlations). External validation in a smaller in-house data set, however, achieved only 67-71% accuracy. The large number of features in optimal models can be attributed to etiological heterogeneity under the clinical ASD umbrella. Lower accuracy in external validation is expected due to differences in unknown composition of ASD variants across samples. High accuracy in the main data set is unlikely due to noise overfitting, but rather indicates optimized characterization of a given cohort.

Indexed as

Brain MappingMachine LearningMagnetic Resonance ImagingAdolescentAdultAlgorithmsAutism Spectrum DisorderBrainChildCohort StudiesConnectomeFemaleHumansMaleModels, NeurologicalYoung Adultautism spectrum disorderconditional random forestdiagnostic predictionintrinsic functional connectivitymachine learningresting-state fMRI

Identifiers

PMID28825309
PMCPMC5653144
OpenAlexW2748583777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.