Evidence map›Paper›PMID 28825121›Full record

ArticleEuropean biophysics journal : EBJ2017

Mutagenesis of the NaChBac sodium channel discloses a functional role for a conserved S6 asparagine.

Andrias O O'Reilly, Anja Lattrell, Andrew J Miles, Alexandra B Klinger, Carla Nau, B A Wallace, Angelika Lampert

Open access · hybridAbstract read
In one paragraph

Article in European biophysics journal : EBJ, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Andrias O O'ReillyInstitute of Physiology and Pathophysiology, Friedrich-Alexander Universität Erlangen-Nürnberg, Universitätsstraße 17, 91054, Erlangen, Germany. a.o.oreilly@ljmu.ac.uk.ORCID http://orcid.org/0000-0003-3449-2368
Anja LattrellDepartment of Anesthesiology, Friedrich-Alexander Universität Erlangen-Nürnberg, Krankenhausstrasse 12, 91054, Erlangen, Germany.
Andrew J MilesInstitute of Structural and Molecular Biology, Birkbeck College, University of London, London, WC1E 7HX, UK.
Alexandra B KlingerInstitute of Physiology and Pathophysiology, Friedrich-Alexander Universität Erlangen-Nürnberg, Universitätsstraße 17, 91054, Erlangen, Germany.
Carla NauDepartment of Anesthesiology, Friedrich-Alexander Universität Erlangen-Nürnberg, Krankenhausstrasse 12, 91054, Erlangen, Germany.
B A WallaceInstitute of Structural and Molecular Biology, Birkbeck College, University of London, London, WC1E 7HX, UK.ORCID http://orcid.org/0000-0001-9649-5092
Angelika LampertInstitute of Physiology and Pathophysiology, Friedrich-Alexander Universität Erlangen-Nürnberg, Universitätsstraße 17, 91054, Erlangen, Germany.
Friedrich-Alexander-Universität Erlangen-Nürnberg · DEInstitute of Structural and Molecular Biology · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/B/02959Biotechnology and Biological Sciences Research Council J019135Biotechnology and Biological Sciences Research Council L006790Deutsche Forschungsgemeinschaft DFG LA2740/2-1Deutsche Forschungsgemeinschaft KFO 130Deutsche Forschungsgemeinschaft NA-350/3-3H2020 Marie Skłodowska-Curie Actions (BE) FP7-PEOPLE-2010-IEFH2020 Marie Skłodowska-Curie Actions (BE) No 275768
6 · The paper itself

Abstract

Asparagine is conserved in the S6 transmembrane segments of all voltage-gated sodium, calcium, and TRP channels identified to date. A broad spectrum of channelopathies including cardiac arrhythmias, epilepsy, muscle diseases, and pain disorders is associated with its mutation. To investigate its effects on sodium channel functional properties, we mutated the simple prokaryotic sodium channel NaChBac. Electrophysiological characterization of the N225D mutant reveals that this conservative substitution shifts the voltage-dependence of inactivation by 25 mV to more hyperpolarized potentials. The mutant also displays greater thermostability, as determined by synchrotron radiation circular dichroism spectroscopy studies of purified channels. Based on our analyses of high-resolution structures of NaChBac homologues, we suggest that the side-chain amine group of asparagine 225 forms one or more hydrogen bonds with different channel elements and that these interactions are important for normal channel function. The N225D mutation eliminates these hydrogen bonds and the structural consequences involve an enhanced channel inactivation.

Indexed as

AsparagineConserved SequenceMutagenesis, Site-DirectedAmino Acid SequenceBacterial ProteinsHEK293 CellsHumansModels, MolecularProtein ConformationProtein StabilitySodium ChannelsTemperatureAsparagineBacterial ProteinsNaChBac protein, bacteriaSodium ChannelsCircular dichroism spectroscopyIon channel inactivationMolecular modelingThermal stabilityWhole-cell patch clamp

Identifiers

PMID28825121
PMCPMC5599482
OpenAlexW2746256309

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.