Evidence map›Paper›PMID 28824590›Full record

ArticleFrontiers in microbiology2017

Fungal Diversity in Tomato Rhizosphere Soil under Conventional and Desert Farming Systems.

Elham A Kazerooni, Sajeewa S N Maharachchikumbura, Velazhahan Rethinasamy, Hamed Al-Mahrouqi, Abdullah M Al-Sadi

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elham A KazerooniDepartment of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos UniversityMuscat, Oman.
Sajeewa S N MaharachchikumburaDepartment of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos UniversityMuscat, Oman.
Velazhahan RethinasamyDepartment of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos UniversityMuscat, Oman.
Hamed Al-MahrouqiDepartment of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos UniversityMuscat, Oman.
Abdullah M Al-SadiDepartment of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos UniversityMuscat, Oman.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study examined fungal diversity and composition in conventional (CM) and desert farming (DE) systems in Oman. Fungal diversity in the rhizosphere of tomato was assessed using 454-pyrosequencing and culture-based techniques. Both techniques produced variable results in terms of fungal diversity, with 25% of the fungal classes shared between the two techniques. In addition, pyrosequencing recovered more taxa compared to direct plating. These findings could be attributed to the ability of pyrosequencing to recover taxa that cannot grow or are slow growing on culture media. Both techniques showed that fungal diversity in the conventional farm was comparable to that in the desert farm. However, the composition of fungal classes and taxa in the two farming systems were different. Pyrosequencing revealed that

Indexed as

desert fungifarming systemfungal communitypathogensaprophytes

Identifiers

PMID28824590
PMCPMC5539375

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.