Evidence map›Paper›PMID 28824413›Full record

ArticleFrontiers in aging neuroscience2017

DNA Methylation of Synaptic Genes in the Prefrontal Cortex Is Associated with Aging and Age-Related Cognitive Impairment.

Lara Ianov, Alberto Riva, Ashok Kumar, Thomas C Foster

Open access · goldAbstract read
In one paragraph

Article in Frontiers in aging neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 62 citations in OpenAlex.

  1. Gene-specific DNA methylation responses to PbEnvironmental epigenetics · 2026
    Article
  2. Review
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  7. Article
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  11. 'Arc'-hitecture of normal cognitive aging.Ageing research reviews · 2022
    Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Role of mismatch repair in aging.International journal of biological sciences · 2021
    Review
  17. Article
  18. Epigenetic Mechanisms of Learning and Memory: Implications for Aging.International journal of molecular sciences · 2020
    Review
  19. Article
  20. Alteration of the brain methylation landscape following postnatal inflammatory injury in rat pups.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lara IanovDepartment of Neuroscience, McKnight Brain Institute, University of Florida, GainesvilleFL, United States.
Alberto RivaBioinformatics Core, Interdisciplinary Center for Biotechnology Research, University of Florida, GainesvilleFL, United States.
Ashok KumarDepartment of Neuroscience, McKnight Brain Institute, University of Florida, GainesvilleFL, United States.
Thomas C FosterDepartment of Neuroscience, McKnight Brain Institute, University of Florida, GainesvilleFL, United States.
University of Florida · US

Funding

University of Florida Older Americans Independence Center (OAIC)P30AG028740 · NIA · UNIVERSITY OF FLORIDA · PI Peihua Qiu · 2007 to 2026
$22.8M
Estrogen and cognition over the lifespanR01AG037984 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C, KUMAR, ASHOK · 2011 to 2022
$3.3M
Signaling cascades and memory deficits during agingR37AG036800 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2010 to 2018
$2.6M
Use of viral-vectors for studying effects of chronic inflammation on executive functionR01AG052258 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2016 to 2020
$1.9M
Systemic inflammation in regulating the onset and progression of brain agingR01AG049711 · NIA · UNIVERSITY OF FLORIDA · PI FOSTER, THOMAS C · 2015 to 2019
$1.5M
NIA NIH HHS P30 AG028740NIA NIH HHS R01 AG037984NIA NIH HHS R01 AG049711NIA NIH HHS R01 AG052258NIA NIH HHS R37 AG036800
6 · The paper itself

Abstract

The current study investigates DNA methylation as a possible epigenetic regulator of transcription associated with aging and cognitive function. Young and aged male Fischer 344 rats were behaviorally characterized on a set shifting task, and whole genome bisulfite sequencing was employed to profile the DNA methylome of the medial prefrontal cortex (mPFC). DNA methylation was also compared to RNA expression in the mPFC from the same animals. Variability in methylation was mainly observed for CpG sites as opposed to CHG and CHH sites. Gene bodies, specifically introns, contain the highest levels of methylation. During aging, hypermethylation was observed for genes linked to synaptic function and GTPase activity. Furthermore, impaired cognitive flexibility during aging was associated with hypermethylation of genes linked to postsynaptic density, dendrites, the axon terminus, and Ca

Indexed as

agingcognitive flexibilityepigeneticsprefrontal cortexset shifting task

Identifiers

PMID28824413
PMCPMC5539085
OpenAlexW2741099473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.