Evidence map›Paper›PMID 28824043›Full record

ArticleThe Journal of veterinary medical science2017

Genetic variants and phylogenetic analysis of Haemophilus parasuis (HPS) OMPP2 detected in Sichuan, China from 2013 to 2015.

Xulong Wu, Lu Xiao, Yin Wang, Xueping Yao, Zexiao Yang

Abstract read
In one paragraph

Article in The Journal of veterinary medical science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Molecular Characterization and Phylogenetic Analysis ofPathogens (Basel, Switzerland) · 2023
    Article
  2. Editorial: Innate immune evasion strategies during microbial infection.Frontiers in cellular and infection microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xulong WuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu 611130, China.
Lu XiaoSichuan Animal Science Academy, Chengdu, 610066, China.
Yin WangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu 611130, China.
Xueping YaoCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu 611130, China.
Zexiao YangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu 611130, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To investigate the genetic variation in Haemophilus parasuis (HPS) in Sichuan, China, 11 isolates were analyzed based on the outer membrane protein P2 (OMPP2) sequence. Sequence analysis showed that the 11 isolates shared 93.0 to 100% nucleotide homology with 15 reference strains, and the consistency between the 26 strains was 89.0%. The isolates of HPS-1, 2, 4, 5, 6, 7, 8, 10 and 11 had a 69-base deletion from 770 base pairs (bp) to 850 bp, which was infrequent in China. The phylogenetic tree showed that HPS-3 and HPS-8 had closer relationships with European and Japanese strains, but shared 98.7% nucleotide homology with the SW114 Japanese strain.

Indexed as

AnimalsBacterial Outer Membrane ProteinsChinaGenetic VariationHaemophilus InfectionsHaemophilus parasuisPhylogenySequence Analysis, DNASequence HomologySwineSwine DiseasesBacterial Outer Membrane Proteinshaemophilus parasuisouter membrane proteinsequence analysis

Identifiers

PMID28824043
PMCPMC5658552

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.