Evidence map›Paper›PMID 28821860›Full record

ArticleScientific reports2017

GABA accretion reduces Lsi-1 and Lsi-2 gene expressions and modulates physiological responses in Oryza sativa to provide tolerance towards arsenic.

Navin Kumar, Arvind Kumar Dubey, Atul Kumar Upadhyay, Ambedkar Gautam, Ruma Ranjan, Saripella Srikishna, Nayan Sahu, Soumit Kumar Behera, Shekhar Mallick

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 71 citations in OpenAlex.

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  10. Truncation of the calmodulin binding domain in rice glutamate decarboxylase 4 (Molecular breeding : new strategies in plant improvement · 2024
    Article
  11. Review
  12. Exogenous γ-aminobutyric acid and Bacillus pumilus reduce arsenic uptake and toxicity in rice.Environmental science and pollution research international · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Navin KumarCSIR-National Botanical Research Institute, Lucknow, India.ORCID 0000-0003-2380-9489
Arvind Kumar DubeyCSIR-National Botanical Research Institute, Lucknow, India.
Atul Kumar UpadhyayCSIR-National Botanical Research Institute, Lucknow, India.
Ambedkar GautamCSIR-National Botanical Research Institute, Lucknow, India.
Ruma RanjanCSIR-National Botanical Research Institute, Lucknow, India.
Saripella SrikishnaDepartment of Biochemistry, Faculty of Science, Banaras Hindu University, Varanasi, India.
Nayan SahuCSIR-National Botanical Research Institute, Lucknow, India.
Soumit Kumar BeheraCSIR-National Botanical Research Institute, Lucknow, India.
Shekhar MallickCSIR-National Botanical Research Institute, Lucknow, India. shekharm@nbri.res.in.ORCID 0000-0001-5041-9692
National Botanical Research Institute · INBanaras Hindu University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GABA counteracts wide range of stresses through regulation of GABA shunt pathway in plants. Although, GABA assisted tolerance against As toxicity in plants is still unexplored. We have examined GABA induced tolerance in rice seedlings with two exposure periods of GABA i.e., short term and long term. Results showed that accumulation of GABA reduced the expressions of Lsi-1 and Lsi-2 transporter genes, which ultimately decreased the accumulation of As in rice seedlings. The accumulation of GABA also modulated the gene expression of GABA shunt pathway and activity of antioxidant enzymes, which strongly induced the tolerance in plants. Antioxidant enzymes such as CAT, POD, GPX and SOD showed maximum alteration in activity with GABA accretion. In both exposure periods, long term accumulation of GABA was highly efficient to provide tolerance to plants against As(III), while higher level of GABA at short term was toxic. Tolerance responses of GABA towards As(III) was reflected by minimal changes in various physiological (WUE, A, gs, PhiPS2, qp, NPQ, ETR and Trmmol) and growth parameters with concomitant accumulation. Oxidative stress marker such as TBARS and H

Indexed as

Adaptation, BiologicalGene Expression Regulation, PlantAntioxidantsArsenicgamma-Aminobutyric AcidLipid MetabolismLipid PeroxidationOryzaPlant ProteinsPlant RootsStress, PhysiologicalAntioxidantsArsenicgamma-Aminobutyric AcidPlant Proteins

Identifiers

PMID28821860
PMCPMC5562799
OpenAlexW2749657876

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.