Evidence map›Paper›PMID 28821734›Full record

ArticleScientific reports2017

Transcriptional transitions in Alphonso mango (Mangifera indica L.) during fruit development and ripening explain its distinct aroma and shelf life characteristics.

Ashish B Deshpande, Krishanpal Anamika, Vineet Jha, Hemangi G Chidley, Pranjali S Oak, Narendra Y Kadoo, Keshav H Pujari, Ashok P Giri, Vidya S Gupta

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
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  5. Review
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  8. Article
  9. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2022
    Article
  10. Article
  11. Review
  12. Article
  13. Nutritional Composition and Bioactive Compounds in Three Different Parts of Mango Fruit.International journal of environmental research and public health · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Chemical Composition of Mango (Frontiers in plant science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ashish B DeshpandePlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India.
Krishanpal AnamikaLabs, Persistent Systems Limited, Pingala-Aryabhata, Erandwane, Pune, 411004, India.
Vineet JhaLabs, Persistent Systems Limited, Pingala-Aryabhata, Erandwane, Pune, 411004, India.
Hemangi G ChidleyPlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India.
Pranjali S OakPlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India.
Narendra Y KadooPlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India.ORCID 0000-0002-9079-1226
Keshav H PujariDr. Balasaheb Sawant Konkan Agriculture University, Dapoli, 415712, Maharashtra, India.
Ashok P GiriPlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India.
Vidya S GuptaPlant Molecular Biology Group, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, 411008, Maharashtra, India. vs.gupta@ncl.res.in.
National Chemical Laboratory · INPersistent Systems (India) · INDr. Balasaheb Sawant Konkan Krishi Vidyapeeth · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alphonso is known as the "King of mangos" due to its unique flavor, attractive color, low fiber pulp and long shelf life. We analyzed the transcriptome of Alphonso mango through Illumina sequencing from seven stages of fruit development and ripening as well as flower. Total transcriptome data from these stages ranged between 65 and 143 Mb. Importantly, 20,755 unique transcripts were annotated and 4,611 were assigned enzyme commission numbers, which encoded 142 biological pathways. These included ethylene and flavor related secondary metabolite biosynthesis pathways, as well as those involved in metabolism of starch, sucrose, amino acids and fatty acids. Differential regulation (p-value ≤ 0.05) of thousands of transcripts was evident in various stages of fruit development and ripening. Novel transcripts for biosynthesis of mono-terpenes, sesqui-terpenes, di-terpenes, lactones and furanones involved in flavor formation were identified. Large number of transcripts encoding cell wall modifying enzymes was found to be steady in their expression, while few were differentially regulated through these stages. Novel 79 transcripts of inhibitors of cell wall modifying enzymes were simultaneously detected throughout Alphonso fruit development and ripening, suggesting controlled activity of these enzymes involved in fruit softening.

Indexed as

OdorantsTranscription, GeneticCell WallEnzyme InhibitorsFlowersFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGene OntologyGenes, PlantGlycoside HydrolasesMangiferaPhylogenyReproducibility of ResultsRNA, MessengerEnzyme InhibitorsGlycoside HydrolasesRNA, Messenger

Identifiers

PMID28821734
PMCPMC5562913
OpenAlexW2746517967

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.