Evidence map›Paper›PMID 28820441›Full record

ArticleNutrients2017

Genome-Wide Interaction Study of Omega-3 PUFAs and Other Fatty Acids on Inflammatory Biomarkers of Cardiovascular Health in the Framingham Heart Study.

Jenna Veenstra, Anya Kalsbeek, Jason Westra, Craig Disselkoen, Caren Smith, Nathan Tintle

Open access · goldAbstract read
In one paragraph

Article in Nutrients, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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  10. Leveraging summary statistics to make inferences about complex phenotypes in large biobanks.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jenna VeenstraDepartment of Mathematics, Statistics, and Computer Science, Dordt College, Sioux Center, IA 51250, USA. jnnvnstr@dordt.edu.
Anya KalsbeekDepartment of Mathematics, Statistics, and Computer Science, Dordt College, Sioux Center, IA 51250, USA. nyklsbk@dordt.edu.
Jason WestraDepartment of Mathematics, Statistics, and Computer Science, Dordt College, Sioux Center, IA 51250, USA. westrajason@hotmail.com.
Craig DisselkoenDepartment of Mathematics, Statistics, and Computer Science, Dordt College, Sioux Center, IA 51250, USA. cdisselk@eng.ucsd.edu.
Caren SmithJean Mayer USDA Human Nutrition Research Center on Aging, Tufts University, Boston, MA, 02153, USA. Caren.Smith@tufts.edu.
Nathan TintleDepartment of Mathematics, Statistics, and Computer Science, Dordt College, Sioux Center, IA 51250, USA. Nathan.Tintle@dordt.edu.
Dordt University · USTufts University · US

Funding

Analyzing the behavior and interpreting the results of gene based tests of rare variant associationR15HG006915 · NHGRI · DORDT COLLEGE · PI TINTLE, NATHAN L · 2012 to 2020
$1.3M
Red Blood Cell Fatty Acid Biomarkers and Cardiovascular Disease RiskR01HL089590 · NHLBI · SANFORD RESEARCH/USD · PI HARRIS, WILLIAM S · 2008 to 2011
$683k
Genetic predictors of metabolic responses to dairyK08HL112845 · NHLBI · TUFTS UNIVERSITY BOSTON · PI SMITH, CAREN ELIZABETH · 2013 to 2017
$474k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
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NHGRI NIH HHS R15 HG006915NHLBI NIH HHS K08 HL112845NHLBI NIH HHS N01 HC025195NHLBI NIH HHS R01 HL089590
6 · The paper itself

Abstract

Numerous genetic loci have been identified as being associated with circulating fatty acid (FA) levels and/or inflammatory biomarkers of cardiovascular health (e.g., C-reactive protein). Recently, using red blood cell (RBC) FA data from the Framingham Offspring Study, we conducted a genome-wide association study of over 2.5 million single nucleotide polymorphisms (SNPs) and 22 RBC FAs (and associated ratios), including the four Omega-3 FAs (ALA, DHA, DPA, and EPA). Our analyses identified numerous causal loci. In this manuscript, we investigate the extent to which polyunsaturated fatty acid (PUFA) levels moderate the relationship of genetics to cardiovascular health biomarkers using a genome-wide interaction study approach. In particular, we test for possible gene-FA interactions on 9 inflammatory biomarkers, with 2.5 million SNPs and 12 FAs, including all Omega-3 PUFAs. We identified eighteen novel loci, including loci which demonstrate strong evidence of modifying the impact of heritable genetics on biomarker levels, and subsequently cardiovascular health. The identified genes provide increased clarity on the biological functioning and role of Omega-3 PUFAs, as well as other common fatty acids, in cardiovascular health, and suggest numerous candidate loci for future replication and biological characterization.

Indexed as

Genome-Wide Association StudyAgedBiomarkersCardiovascular SystemChemokine CCL2Chromosomes, HumanClaudinsCohort StudiesC-Reactive ProteinCytokinesDocosahexaenoic AcidsEicosapentaenoic AcidErythrocytesFatty AcidsFatty Acids, Omega-3FemaleBiomarkersCCL2 protein, humanCHCHD3 protein, humanChemokine CCL2CHRM3 protein, humanClaudinsCLDN11 protein, humanC-Reactive ProteinCytokinesDocosahexaenoic AcidsEicosapentaenoic AcidFatty AcidsFatty Acids, Omega-3Mitochondrial ProteinsReceptor, Muscarinic M3alpha linoleic acidcardiovascular diseasedocosahexaenoic acidfatty acidsinflammatory biomarkersomega-3

Identifiers

PMID28820441
PMCPMC5579693
OpenAlexW2749816302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.