Evidence map›Paper›PMID 28819234›Full record

ArticleScientific reports2017

Transcriptome of neonatal preBötzinger complex neurones in Dbx1 reporter mice.

John A Hayes, Andrew Kottick, Maria Cristina D Picardo, Andrew D Halleran, Ronald D Smith, Gregory D Smith, Margaret S Saha, Christopher A Del Negro

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  5. Review
  6. Molecular Organization of Autonomic, Respiratory, and Spinally-Projecting Neurons in the Mouse Ventrolateral Medulla.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  7. Article
  8. Inhibitory Subpopulations in preBötzinger Complex Play Distinct Roles in Modulating Inspiratory Rhythm and Pattern.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  9. Article
  10. Role of NaCell reports · 2023
    Article
  11. Article
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  13. Review
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  15. Article
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  17. Unraveling the Mechanisms Underlying Irregularities in Inspiratory Rhythm Generation in a Mouse Model of Parkinson's Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

John A HayesDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0003-2849-7672
Andrew KottickDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0002-3731-5140
Maria Cristina D PicardoDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0001-8912-2175
Andrew D HalleranDepartment of Biology, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0001-8720-1451
Ronald D SmithDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0003-2736-0092
Gregory D SmithDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0002-1054-6790
Margaret S SahaDepartment of Biology, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA.ORCID 0000-0003-0096-2667
Christopher A Del NegroDepartment of Applied Science, Integrated Science Center, 540 Landrum Dr., The College of William and Mary, Williamsburg, VA, 23185, USA. cadeln@wm.edu.ORCID 0000-0002-7848-8224
William & Mary · US

Funding

Neurophysiology of breathing behavior in neonatal mice in vitroR01HL104127 · NHLBI · COLLEGE OF WILLIAM AND MARY · PI DEL NEGRO, CHRISTOPHER A. · 2010 to 2018
$2.6M
Role of TRP Channels in Respiratory Rhythm and BreathingR21NS087257 · NINDS · COLLEGE OF WILLIAM AND MARY · PI DEL NEGRO, CHRISTOPHER A. · 2015 to 2016
$388k
Plasticity and Regulation in Xenopus Anterior-Posterior PatterningR15HD077624 · NICHD · COLLEGE OF WILLIAM AND MARY · PI SAHA, MARGARET S · 2013 to 2013
$368k
NHLBI NIH HHS R01 HL104127NICHD NIH HHS R15 HD077624NINDS NIH HHS R21 NS087257
6 · The paper itself

Abstract

We sequenced the transcriptome of brainstem interneurons in the specialized respiratory rhythmogenic site dubbed preBötzinger Complex (preBötC) from newborn mice. To distinguish molecular characteristics of the core oscillator we compared preBötC neurons derived from Dbx1-expressing progenitors that are respiratory rhythmogenic to neighbouring non-Dbx1-derived neurons, which support other respiratory and non-respiratory functions. Results in three categories are particularly salient. First, Dbx1 preBötC neurons express κ-opioid receptors in addition to μ-opioid receptors that heretofore have been associated with opiate respiratory depression, which may have clinical applications. Second, Dbx1 preBötC neurons express the hypoxia-inducible transcription factor Hif1a at levels three-times higher than non-Dbx1 neurons, which links core rhythmogenic microcircuits to O

Indexed as

TranscriptomeAnimalsAnimals, NewbornBiomarkersFemaleGene ExpressionGene Expression ProfilingGenes, ReporterHomeodomain ProteinsImmunohistochemistryMiceMice, TransgenicNeuronsNeurotransmitter AgentsPeptidesBiomarkersDbx1 protein, mouseHomeodomain ProteinsNeurotransmitter AgentsPeptides

Identifiers

PMID28819234
PMCPMC5561182
OpenAlexW2745309600

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.