Evidence map›Paper›PMID 28819199›Full record

ArticleScientific reports2017

Transcriptome Analysis of the Effects of Shell Removal and Exogenous Gibberellin on Germination of Zanthoxylum Seeds.

Jikang Sun, Ping Wang, Tao Zhou, Jian Rong, Hao Jia, Zhiming Liu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jikang SunCollege of Life Science and Technology, Central South University of Forestry and Technology, Changsha, Hunan, China.
Ping WangCollege of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, Hunan, China. wangping@csuft.edu.cn.
Tao ZhouCollege of Life Science and Technology, Central South University of Forestry and Technology, Changsha, Hunan, China.
Jian RongCollege of Life Science and Technology, Central South University of Forestry and Technology, Changsha, Hunan, China.
Hao JiaCollege of Life Science and Technology, Central South University of Forestry and Technology, Changsha, Hunan, China.
Zhiming LiuDepartment of Biology, Eastern New Mexico University, Portales, NM88130, USA.
Central South University of Forestry and Technology · CNCentral South University · CNEastern New Mexico University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The zanthoxylum seeds are oil-rich and have a very thick, dense and oily shell. In the natural conditions the seeds have a very low germination rate. Prior to treatment with GAs to promote germination, the seeds were usually soaked in sulfuric acid to remove shells easily. A high-throughput sequencing of mRNAs was performed to investigate the effects of the above treatments on the germination of zanthoxylum seeds. Seven libraries were assembled into 100,982 unigenes and 59,509 unigenes were annotated. We focused on the expression profiles of the key genes related to the oil metabolisms and hormone regulations during seed germination. Our data indicated the endogenous ABA of seeds was rich. The effects that the exogenous GAs promoted germination were apparent in the secong day of germination. Especially, for the first time our results indicated the exogenous GAs lowered the aerobic metabolism including the oil metabolisms during imbibition. We inferred that the exogenous GAs had inhibitory effects on the oil metabolisms to avoide oxidative damages to the imbibed seeds, and the seed shell played the role similiar to the exogenous GAs in the initial stage of germination in the natural conditions.

Indexed as

AerobiosisGene Expression ProfilingGerminationGibberellinsHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationOilsSeedsZanthoxylumGibberellinsOils

Identifiers

PMID28819199
PMCPMC5561108
OpenAlexW2745170481

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.