Evidence map›Paper›PMID 28819163›Full record

ArticleScientific reports2017

Fusion protein analysis reveals the precise regulation between Hsp70 and Hsp100 during protein disaggregation.

Sayaka Hayashi, Yosuke Nakazaki, Kei Kagii, Hiromi Imamura, Yo-Hei Watanabe

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. PV1 Protein fromInternational journal of molecular sciences · 2020
    Article
  6. Protein aggregation in bacteria.FEMS microbiology reviews · 2020
    Review
  7. Article
  8. Article
  9. The amino-terminal domain ofFEBS open bio · 2018
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sayaka HayashiDepartment of Biology, Faculty of Science and Engineering, Konan University, Kobe, Japan.
Yosuke NakazakiDepartment of Biology, Faculty of Science and Engineering, Konan University, Kobe, Japan.
Kei KagiiDepartment of Biology, Faculty of Science and Engineering, Konan University, Kobe, Japan.
Hiromi ImamuraDepartment of Functional Biology, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.
Yo-Hei WatanabeDepartment of Biology, Faculty of Science and Engineering, Konan University, Kobe, Japan. ywatanab@center.konan-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ClpB, a bacterial Hsp100, is a ring-shaped AAA+ chaperone that can reactivate aggregated proteins in cooperation with DnaK, a bacterial Hsp70, and its co-factors. ClpB subunits comprise two AAA+ modules with an interstitial rod-shaped M-domain. The M-domain regulates ClpB ATPase activity and interacts directly with the DnaK nucleotide-binding domain (NBD). Here, to clarify how these functions contribute to the disaggregation process, we constructed ClpB, DnaK, and aggregated YFP fusion proteins in various combinations. Notably, i) DnaK activates ClpB only when the DnaK substrate-binding domain (SBD) is in the closed conformation, affording high DnaK-peptide affinity; ii) although NBD alone can activate ClpB, SBD is required for disaggregation; and iii) tethering aggregated proteins to the activated ClpB obviates SBD requirements. These results indicate that DnaK activates ClpB only when the SBD tightly holds aggregated proteins adjacent to ClpB for effective disaggregation.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsHeat-Shock ProteinsHSP70 Heat-Shock ProteinsModels, MolecularMutationProtein AggregatesProtein BindingProtein ConformationStructure-Activity RelationshipThermus thermophilusAdenosine TriphosphatasesBacterial ProteinsHeat-Shock ProteinsHSP70 Heat-Shock ProteinsProtein Aggregates

Identifiers

PMID28819163
PMCPMC5561102

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.