Evidence map›Paper›PMID 28819139›Full record

ArticleNature communications2017

Landscape of submitochondrial protein distribution.

F-Nora Vögtle, Julia M Burkhart, Humberto Gonczarowska-Jorge, Cansu Kücükköse, Asli Aras Taskin, Dominik Kopczynski, Robert Ahrends, Dirk Mossmann, Albert Sickmann, René P Zahedi and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 186 citations in OpenAlex.

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  20. Mitochondrial protein import stress.Nature cell biology · 2025
    Review

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

F-Nora VögtleInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, University of Freiburg, Freiburg im Breisgau, 79104, Germany.
Julia M BurkhartLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany.
Humberto Gonczarowska-JorgeLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany.
Cansu KücükköseInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, University of Freiburg, Freiburg im Breisgau, 79104, Germany.
Asli Aras TaskinInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, University of Freiburg, Freiburg im Breisgau, 79104, Germany.
Dominik KopczynskiLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany.
Robert AhrendsLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany.
Dirk MossmannInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, University of Freiburg, Freiburg im Breisgau, 79104, Germany.
Albert SickmannLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany.
René P ZahediLeibniz-Institut für Analytische Wissenschaften-ISAS-e.V, Dortmund, 44139, Germany. zahedi@isas.de.
Chris MeisingerInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, University of Freiburg, Freiburg im Breisgau, 79104, Germany. chris.meisinger@biochemie.uni-freiburg.de.
Leibniz Institute for Analytical Sciences - ISAS · DEUniversity of Freiburg · DERuhr University Bochum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mitochondrial proteome comprises ~1000 (yeast)-1500 (human) different proteins, which are distributed into four different subcompartments. The sublocalization of these proteins within the organelle in most cases remains poorly defined. Here we describe an integrated approach combining stable isotope labeling, various protein enrichment and extraction strategies and quantitative mass spectrometry to produce a quantitative map of submitochondrial protein distribution in S. cerevisiae. This quantitative landscape enables a proteome-wide classification of 986 proteins into soluble, peripheral, and integral mitochondrial membrane proteins, and the assignment of 818 proteins into the four subcompartments: outer membrane, inner membrane, intermembrane space, or matrix. We also identified 206 proteins that were not previously annotated as localized to mitochondria. Furthermore, the protease Prd1, misannotated as intermembrane space protein, could be re-assigned and characterized as a presequence peptide degrading enzyme in the matrix.Protein localization plays an important role in the regulation of cellular physiology. Here the authors use an integrated proteomics approach to localize proteins to the mitochondria and provide a detailed map of their specific localization within the organelle.

Indexed as

Amino Acid SequenceHumansImmunoblottingIntracellular MembranesMembrane ProteinsMitochondrial ProteinsProteomeProteomicsSaccharomyces cerevisiae ProteinsTandem Mass SpectrometryMembrane ProteinsMitochondrial ProteinsProteomeSaccharomyces cerevisiae Proteins

Identifiers

PMID28819139
PMCPMC5561175
OpenAlexW2743319478

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.