Evidence map›Paper›PMID 28819099›Full record

ArticleNature communications2017

The genetic basis of natural variation in a phoretic behavior.

Daehan Lee, Heeseung Yang, Jun Kim, Shannon Brady, Stefan Zdraljevic, Mostafa Zamanian, Heekyeong Kim, Young-Ki Paik, Leonid Kruglyak, Erik C Andersen and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Glial expression of a steroidogenic enzyme underlies natural variation in hitchhiking behavior.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Genetic variation in parasite avoidance, yet no evidence for constitutive fitness costs.Evolution; international journal of organic evolution · 2024
    Article
  8. Article
  9. Article
  10. Automated scoring of nematode nictation on a textured background.bioRxiv : the preprint server for biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. The GeneG3 (Bethesda, Md.) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Daehan LeeDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, Seoul, 08826, Korea.ORCID http://orcid.org/0000-0002-0546-8484
Heeseung YangDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, Seoul, 08826, Korea.
Jun KimDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, Seoul, 08826, Korea.
Shannon BradyDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, 60208, USA.
Stefan ZdraljevicDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, 60208, USA.
Mostafa ZamanianDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, 60208, USA.
Heekyeong KimYonsei Proteome Research Center, Yonsei University, Seoul, 03722, Korea.
Young-Ki PaikYonsei Proteome Research Center, Yonsei University, Seoul, 03722, Korea.
Leonid KruglyakDepartment of Human Genetics and Biological Chemistry, University of California, Los Angeles, CA, 90095, USA.
Erik C AndersenDepartment of Molecular Biosciences, Northwestern University, Evanston, IL, 60208, USA. erik.andersen@northwestern.edu.ORCID http://orcid.org/0000-0003-0229-9651
Junho LeeDepartment of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, Seoul, 08826, Korea. elegans@snu.ac.kr.
Northwestern University · USSeoul National University · KRYonsei University · KRHoward Hughes Medical Institute · US

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Developing Capacity to Evaluate Training Programs via Development of Human, Institutional and Social CapitalT32GM008449 · NIGMS · NORTHWESTERN UNIVERSITY · PI LEONARD, JOSHUA NATHANIEL · 1993 to 2023
$7.8M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Genetic dissection of transcriptional and organismal phenotypes in C. elegansR01HG004321 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KRUGLYAK, LEONID · 2007 to 2014
$1.9M
Determination of the distribution of fitness effects of mutations in C. elegansR01GM107227 · NIGMS · UNIVERSITY OF FLORIDA · PI BAER, CHARLES F · 2014 to 2017
$1.1M
NHGRI NIH HHS R01 HG004321NIGMS NIH HHS R01 GM107227NIGMS NIH HHS T32 GM008061NIGMS NIH HHS T32 GM008449NIH HHS P40 OD010440
6 · The paper itself

Abstract

Phoresy is a widespread form of commensalism that facilitates dispersal of one species through an association with a more mobile second species. Dauer larvae of the nematode Caenorhabditis elegans exhibit a phoretic behavior called nictation, which could enable interactions with animals such as isopods or snails. Here, we show that natural C. elegans isolates differ in nictation. We use quantitative behavioral assays and linkage mapping to identify a genetic locus (nict-1) that mediates the phoretic interaction with terrestrial isopods. The nict-1 locus contains a Piwi-interacting small RNA (piRNA) cluster; we observe that the Piwi Argonaute PRG-1 is involved in the regulation of nictation. Additionally, this locus underlies a trade-off between offspring production and dispersal. Variation in the nict-1 locus contributes directly to differences in association between nematodes and terrestrial isopods in a laboratory assay. In summary, the piRNA-rich nict-1 locus could define a novel mechanism underlying phoretic interactions.Nematodes use a characteristic set of movements, called nictation, to hitchhike on more mobile animals. Here, Lee et al. identify a genetic locus in the nematode Caenorhabditis elegans that underlies nictation and contributes to successful hitchhiking, but at expense of reduced offspring production.

Indexed as

Behavior, AnimalAnimalsArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsChromosome MappingHost-Parasite InteractionsIsopodaLarvaRNA, Small InterferingSymbiosisArgonaute ProteinsCaenorhabditis elegans ProteinsPRG-1 protein, C elegansRNA, Small Interfering

Identifiers

PMID28819099
PMCPMC5561207
OpenAlexW2744417500

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.