Evidence map›Paper›PMID 28817696›Full record

ArticlePloS one2017

Phenotypic and molecular characterization of sweet sorghum accessions for bioenergy production.

Michele Jorge da Silva, Maria Marta Pastina, Vander Fillipe de Souza, Robert Eugene Schaffert, Pedro Crescêncio Souza Carneiro, Roberto Willians Noda, José Eustáquio de Souza Carneiro, Cynthia Maria Borges Damasceno, Rafael Augusto da Costa Parrella

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Characterization ofFrontiers in plant science · 2023
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Michele Jorge da SilvaDepartamento de Biologia Geral, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brasil.ORCID http://orcid.org/0000-0001-8648-8825
Maria Marta PastinaEmbrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.
Vander Fillipe de SouzaDepartamento de Engenharia de Biossistemas, Universidade Federal de São João del-Rei, São João del-Rei, Minas Gerais, Brasil.
Robert Eugene SchaffertEmbrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.
Pedro Crescêncio Souza CarneiroDepartamento de Biologia Geral, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brasil.
Roberto Willians NodaEmbrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.
José Eustáquio de Souza CarneiroDepartamento de Fitotecnia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brasil.
Cynthia Maria Borges DamascenoEmbrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.
Rafael Augusto da Costa ParrellaEmbrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sweet sorghum [Sorghum bicolor (L.) Moench] is a type of cultivated sorghum characterized by the accumulation of high levels of sugar in the stems and high biomass accumulation, making this crop an important feedstock for bioenergy production. Sweet sorghum breeding programs that focus on bioenergy have two main goals: to improve quantity and quality of sugars in the juicy stem and to increase fresh biomass productivity. Genetic diversity studies are very important for the success of a breeding program, especially in the early stages, where understanding the genetic relationship between accessions is essential to identify superior parents for the development of improved breeding lines. The objectives of this study were: to perform phenotypic and molecular characterization of 100 sweet sorghum accessions from the germplasm bank of the Embrapa Maize and Sorghum breeding program; to examine the relationship between the phenotypic and the molecular diversity matrices; and to infer about the population structure in the sweet sorghum accessions. Morphological and agro-industrial traits related to sugar and biomass production were used for phenotypic characterization, and single nucleotide polymorphisms (SNPs) were used for molecular diversity analysis. Both phenotypic and molecular characterizations revealed the existence of considerable genetic diversity among the 100 sweet sorghum accessions. The correlation between the phenotypic and the molecular diversity matrices was low (0.35), which is in agreement with the inconsistencies observed between the clusters formed by the phenotypic and the molecular diversity analyses. Furthermore, the clusters obtained by the molecular diversity analysis were more consistent with the genealogy and the historic background of the sweet sorghum accessions than the clusters obtained through the phenotypic diversity analysis. The low correlation observed between the molecular and the phenotypic diversity matrices highlights the complementarity between the molecular and the phenotypic characterization to assist a breeding program.

Indexed as

Genes, PlantRenewable EnergyBiomassGenetic VariationPhenotypePolymorphism, Single NucleotideSorghum

Identifiers

PMID28817696
PMCPMC5560702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.