Evidence map›Paper›PMID 28814506›Full record

ArticleMolecular biology of the cell2017

Role of clathrin in dense core vesicle biogenesis.

Bhavani S Sahu, Paul T Manna, James R Edgar, Robin Antrobus, Sushil K Mahata, Alessandro Bartolomucci, Georg H H Borner, Margaret S Robinson

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Insulin granule biogenesis and exocytosis.Cellular and molecular life sciences : CMLS · 2021
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Bhavani S SahuCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Paul T MannaCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
James R EdgarCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Robin AntrobusCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Sushil K MahataDepartment of Medicine, Veterans Affairs San Diego Healthcare System, San Diego, CA 92161.
Alessandro BartolomucciDepartment of Integrative Biology and Physiology, University of Minnesota, Minneapolis, MN 55455.
Georg H H BornerCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom.
Margaret S RobinsonCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom msr12@cam.ac.uk.
University of Cambridge · GBUniversity of California San Diego · USUniversity of Minnesota · US

Funding

Molecular dissection of TLQP-21 peptide functions in obesityR01DK102496 · NIDDK · UNIVERSITY OF MINNESOTA · PI BARTOLOMUCCI, ALESSANDRO · 2014 to 2018
$1.7M
NIDDK NIH HHS R01 DK102496Wellcome Trust
6 · The paper itself

Abstract

The dense core vesicles (DCVs) of neuroendocrine cells are a rich source of bioactive molecules such as peptides, hormones, and neurotransmitters, but relatively little is known about how they are formed. Using fractionation profiling, a method that combines subcellular fractionation with mass spectrometry, we identified ∼1200 proteins in PC12 cell vesicle-enriched fractions, with DCV-associated proteins showing distinct profiles from proteins associated with other types of vesicles. To investigate the role of clathrin in DCV biogenesis, we stably transduced PC12 cells with an inducible short hairpin RNA targeting clathrin heavy chain, resulting in ∼85% protein loss. DCVs could still be observed in the cells by electron microscopy, but mature profiles were approximately fourfold less abundant than in mock-treated cells. By quantitative mass spectrometry, DCV-associated proteins were found to be reduced approximately twofold in clathrin-depleted cells as a whole and approximately fivefold in vesicle-enriched fractions. Our combined data sets enabled us to identify new candidate DCV components. Secretion assays revealed that clathrin depletion causes a near-complete block in secretagogue-induced exocytosis. Taken together, our data indicate that clathrin has a function in DCV biogenesis beyond its established role in removing unwanted proteins from the immature vesicle.

Indexed as

AnimalsCalcium-Binding ProteinsCells, CulturedClathrinClathrin Heavy ChainsExocytosisMass SpectrometryNeuroendocrine CellsPC12 CellsRatsSecretory VesiclesSubcellular FractionsCalcium-Binding ProteinsClathrinClathrin Heavy Chains

Identifiers

PMID28814506
PMCPMC5620375
OpenAlexW2750063112

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.