Evidence map›Paper›PMID 28814340›Full record

ArticleVirology journal2017

Detection and genetic characterization of canine astroviruses in pet dogs in Guangxi, China.

Huabo Zhou, Lin Liu, Ruikai Li, Yifeng Qin, Qingli Fang, Vinod Rmt Balasubramaniam, Guojun Wang, Zuzhang Wei, Kang Ouyang, Weijian Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

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  17. New viruses associated with canine gastroenteritis.Veterinary journal (London, England : 1997) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Huabo ZhouCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Lin LiuCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Ruikai LiCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Yifeng QinCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Qingli FangCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Vinod Rmt BalasubramaniamJeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Jalan Lagoon Selatan, 47500, Subang Jaya, Selangor, Malaysia.
Guojun WangDepartment of Microbiology, Mount Sinai School of Medicine, New York, NY, 10029, USA.
Zuzhang WeiCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Kang OuyangCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Weijian HuangCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China.
Ying ChenCollege of Animal Science and Technology, Guangxi University, No.100 Daxue Road, Nanning, 530004, People's Republic of China. yingchen@gxu.edu.cn.
Guangxi University · CNIcahn School of Medicine at Mount Sinai · USMonash University Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAstroviruses (AstVs) have been reported to infect and cause gastroenteritis in most animal species. Human AstVs were regarded the causative agent of viral diarrhea in children. In dogs, little is known about the epidemiology and clinical significance of AstV infection.

findingsIn this study, we collected and tested 253 rectal swabs from pet dogs; of which 64 samples (25.3%) tested positive for AstVs with diarrhea and 15 more samples (5.9%) also was identified as AstVs, however without any clinical signs. Phylogenetic analysis of 39 partial ORF1b sequences from these samples revealed that they are similar to AstVs, which can be subdivided into three lineages. Interestingly, out of the 39 isolates sequenced, 16 isolates are shown to be in the Mamastrovirus 5/canine astrovirus (CAstV) lineage and the remaining 23 isolates displayed higher similarities with known porcine astrovirus (PoAstV) 5 and 2. Further, analysis of 13 capsid sequences from these isolates showed that they are closely clustered with Chinese or Italy CAstV isolates.

conclusionsThe findings indicate that CAstVs commonly circulate in pet dogs, and our sequencing results have shown the genomic diversity of CAstVs leading to increasing number of clusters.

Indexed as

GenotypeAnimalsAstroviridae InfectionsCarrier StateChinaCluster AnalysisDog DiseasesDogsFemaleGenetic VariationMaleMamastrovirusPetsPhylogenyPrevalenceSequence Analysis, DNAViral ProteinsCanine astrovirusGenetic diversityPrevalence

Identifiers

PMID28814340
PMCPMC5559842
OpenAlexW2745384218

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.