Evidence map›Paper›PMID 28813667›Full record

ArticleCell reports2017

Human GW182 Paralogs Are the Central Organizers for RNA-Mediated Control of Transcription.

Jessica A Hicks, Liande Li, Masayuki Matsui, Yongjun Chu, Oleg Volkov, Krystal C Johnson, David R Corey

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Nuclear miRNAs: Gene Regulation Activities.International journal of molecular sciences · 2024
    Review
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  7. Article
  8. Review
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  10. Article
  11. mInternational journal of oncology · 2023
    Article
  12. Article
  13. The Multiplicity of Argonaute Complexes in Mammalian Cells.The Journal of pharmacology and experimental therapeutics · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Applying graph database technology for analyzing perturbed co-expression networks in cancer.Database : the journal of biological databases and curation · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jessica A HicksDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
Liande LiDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
Masayuki MatsuiDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
Yongjun ChuDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
Oleg VolkovDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
Krystal C JohnsonDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA.
David R CoreyDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center, 6001 Forest Park Road, Dallas, TX 75390-9041, USA. Electronic address: david.corey@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USSouthwestern Medical Center · USSouthwestern Medical Center

Funding

Recognition of Cellular Targets by single and double-stranded nucleic acidsR35GM118103 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI David R Corey · 2016 to 2026
$5.7M
NIGMS NIH HHS R35 GM118103
6 · The paper itself

Abstract

In the cytoplasm, small RNAs can control mammalian translation by regulating the stability of mRNA. In the nucleus, small RNAs can also control transcription and splicing. The mechanisms for RNA-mediated nuclear regulation are not understood and remain controversial, hindering the effective application of nuclear RNAi and investigation of its natural regulatory roles. Here, we reveal that the human GW182 paralogs TNRC6A/B/C are central organizing factors critical to RNA-mediated transcriptional activation. Mass spectrometry of purified nuclear lysates followed by experimental validation demonstrates that TNRC6A interacts with proteins involved in protein degradation, RNAi, the CCR4-NOT complex, the mediator complex, and histone-modifying complexes. Functional analysis implicates TNRC6A, NAT10, MED14, and WDR5 in RNA-mediated transcriptional activation. These findings describe protein complexes capable of bridging RNA-mediated sequence-specific recognition of noncoding RNA transcripts with the regulation of gene transcription.

Indexed as

RNA SplicingTranscriptional ActivationAnaphase-Promoting Complex-CyclosomeAutoantigensBase SequenceCell NucleusCytoplasmGene SilencingHeLa CellsHistone-Lysine N-MethyltransferaseHumansIntracellular Signaling Peptides and ProteinsMediator ComplexMolecular Sequence AnnotationN-Terminal Acetyltransferase EN-Terminal AcetyltransferasesAnaphase-Promoting Complex-CyclosomeAutoantigensCCR4 protein, humanHistone-Lysine N-MethyltransferaseIntracellular Signaling Peptides and ProteinsMED14 protein, humanMediator ComplexNAT10 protein, humanNR4A2 protein, humanN-Terminal Acetyltransferase EN-Terminal AcetyltransferasesNuclear Receptor Subfamily 4, Group A, Member 2Receptors, CCR4RNA-Binding ProteinsTNRC6A protein, humanWDR5 protein, humanargonauteGW182mass spectrometrynucleusRNA activationRNAiTNRC6Atranscription

Identifiers

PMID28813667
PMCPMC5588873
OpenAlexW2748344419

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.