Evidence map›Paper›PMID 28813660›Full record

ArticleImmunity2017

Neutralizing Antibody Responses to Viral Infections Are Linked to the Non-classical MHC Class II Gene H2-Ob.

Lisa K Denzin, Aly A Khan, Francesca Virdis, Jessica Wilks, Melissa Kane, Helen A Beilinson, Stanislav Dikiy, Laure K Case, Derry Roopenian, Michele Witkowski and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Tuning DO:DM Ratios Modulates MHC Class II Immunopeptidomes.Molecular & cellular proteomics : MCP · 2022
    Article
  18. Review
  19. Article
  20. Genetic and immunological contributors to virus-induced paralysis.Brain, behavior, & immunity - health · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Lisa K DenzinChild Health Institute of NJ, Department of Pediatrics, Rutgers Robert Wood Johnson Medical School, Rutgers, The State University of NJ, New Brunswick, NJ 08901, USA.
Aly A KhanToyota Technological Institute at Chicago, Chicago, IL 60637, USA.
Francesca VirdisChild Health Institute of NJ, Department of Pediatrics, Rutgers Robert Wood Johnson Medical School, Rutgers, The State University of NJ, New Brunswick, NJ 08901, USA.
Jessica WilksDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA.
Melissa KaneDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA.
Helen A BeilinsonDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA.
Stanislav DikiyDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA.
Laure K CaseDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA.
Derry RoopenianThe Jackson Laboratory, Bar Harbor, ME 04609, USA.
Michele WitkowskiChild Health Institute of NJ, Department of Pediatrics, Rutgers Robert Wood Johnson Medical School, Rutgers, The State University of NJ, New Brunswick, NJ 08901, USA.
Alexander V ChervonskyDepartment of Pathology, The University of Chicago, Chicago, IL 60637, USA.
Tatyana V GolovkinaDepartment of Microbiology, The University of Chicago, Chicago, IL 60637, USA. Electronic address: tgolovki@bsd.uchicago.edu.
University of Chicago · USRutgers, The State University of New Jersey · USJackson Laboratory · USToyota Technological Institute at Chicago · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI MARK W. LINGEN · 1985 to 2026
$122.1M
Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007090 · NIAID · UNIVERSITY OF CHICAGO · PI Peter Aidan Savage · 1985 to 2026
$11.7M
New retroviral restriction factorR01AI117535 · NIAID · UNIVERSITY OF CHICAGO · PI GOLOVKINA, TATYANA V · 2016 to 2020
$3.2M
H2-O Mediated Antigen Focusing Modulates B Cell ImmunityR01AI061484 · NIAID · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI DENZIN, LISA K. · 2005 to 2009
$2.1M
Cloning of the vic1 gene, a novel retrovirus restriction factorR01CA134667 · NCI · UNIVERSITY OF CHICAGO · PI GOLOVKINA, TATYANA V · 2008 to 2012
$1.7M
New retroviral restriction factorR56AI117535 · NIAID · UNIVERSITY OF CHICAGO · PI GOLOVKINA, TATYANA V · 2021 to 2021
$776k
A Mass Spectrometry System for Quantitative ProteomicsS10OD016400 · OD · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI LOBEL, PETER · 2014 to 2014
$561k
NCATS NIH HHS UL1 TR000430NCI NIH HHS P30 CA014599NCI NIH HHS P30 CA034196NCI NIH HHS R01 CA134667NIAID NIH HHS R01 AI061484NIAID NIH HHS R01 AI117535NIAID NIH HHS R56 AI117535NIAID NIH HHS T32 AI007090NIDDK NIH HHS P30 DK042086NIH HHS S10 OD016400
6 · The paper itself

Abstract

Select humans and animals control persistent viral infections via adaptive immune responses that include production of neutralizing antibodies. The precise genetic basis for the control remains enigmatic. Here, we report positional cloning of the gene responsible for production of retrovirus-neutralizing antibodies in mice of the I/LnJ strain. It encodes the beta subunit of the non-classical major histocompatibility complex class II (MHC-II)-like molecule H2-O, a negative regulator of antigen presentation. The recessive and functionally null I/LnJ H2-Ob allele supported the production of virus-neutralizing antibodies independently of the classical MHC haplotype. Subsequent bioinformatics and functional analyses of the human H2-Ob homolog, HLA-DOB, revealed both loss- and gain-of-function alleles, which could affect the ability of their carriers to control infections with human hepatitis B (HBV) and C (HCV) viruses. Thus, understanding of the previously unappreciated role of H2-O (HLA-DO) in immunity to infections may suggest new approaches in achieving neutralizing immunity to viruses.

Indexed as

Antibodies, NeutralizingImmunity, HumoralAnimalsAntibodies, ViralAntigen PresentationComputational BiologyFemaleGenetic Predisposition to DiseaseHeLa CellsHepatitis BHepatitis CHistocompatibility Antigens Class IIHLA-D AntigensHumansMaleMammary Tumor Virus, MouseAntibodies, NeutralizingAntibodies, ViralH-2O antigenHistocompatibility Antigens Class IIHLA-D AntigensHLA-DO antigensantigen presentationHLA-DOMHC locusneutralizing antibodiespositional cloningviral infections

Identifiers

PMID28813660
PMCPMC5568092
OpenAlexW2747136565

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.