Evidence map›Paper›PMID 28812932›Full record

ReviewRNA biology2018

Celebrating wobble decoding: Half a century and still much is new.

Paul F Agris, Emily R Eruysal, Amithi Narendran, Ville Y P Väre, Sweta Vangaveti, Srivathsan V Ranganathan

Abstract readReview
In one paragraph

Review in RNA biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed.

  1. Article
  2. Mechanistic Insights Into the Oxidative Reactivity of 2-Selenouridine in tRNA.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  3. RNAViruses · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. tRNA modifications in viral replication.The Journal of biological chemistry · 2026
    Review
  8. ThebioRxiv : the preprint server for biology · 2026
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Paul F Agrisa The RNA Institute , State University of New York , Albany , NY , USA.
Emily R Eruysalb Department of Biology , State University of New York , Albany , NY , USA.
Amithi Narendranb Department of Biology , State University of New York , Albany , NY , USA.
Ville Y P Väreb Department of Biology , State University of New York , Albany , NY , USA.
Sweta Vangavetia The RNA Institute , State University of New York , Albany , NY , USA.
Srivathsan V Ranganathana The RNA Institute , State University of New York , Albany , NY , USA.

Funding

RNA modification: Structure and MechanismR01GM110588 · NIGMS · WESTERN UNIVERSITY OF HEALTH SCIENCES · PI SWAIRJO, MANAL A · 2014 to 2024
$3.9M
NIGMS NIH HHS R01 GM110588
6 · The paper itself

Abstract

A simple post-transcriptional modification of tRNA, deamination of adenosine to inosine at the first, or wobble, position of the anticodon, inspired Francis Crick's Wobble Hypothesis 50 years ago. Many more naturally-occurring modifications have been elucidated and continue to be discovered. The post-transcriptional modifications of tRNA's anticodon domain are the most diverse and chemically complex of any RNA modifications. Their contribution with regards to chemistry, structure and dynamics reveal individual and combined effects on tRNA function in recognition of cognate and wobble codons. As forecast by the Modified Wobble Hypothesis 25 years ago, some individual modifications at tRNA's wobble position have evolved to restrict codon recognition whereas others expand the tRNA's ability to read as many as four synonymous codons. Here, we review tRNA wobble codon recognition using specific examples of simple and complex modification chemistries that alter tRNA function. Understanding natural modifications has inspired evolutionary insights and possible innovation in protein synthesis.

Indexed as

Genetic CodeProtein BiosynthesisRNA Processing, Post-TranscriptionalAdenosineArchaeaBacteriaBase PairingDeaminationEukaryotaEvolution, MolecularInosineModels, MolecularNucleic Acid ConformationRNA, TransferAdenosineInosineRNA, Transfercognate and wobble codon recognitionmodified nucleosidesModified Wobble Hypothesisnucleoside tautomerstranslationtRNAwobble decodingWobble Hypothesiswobble nucleoside

Identifiers

PMID28812932
PMCPMC6103715

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.