Evidence map›Paper›PMID 28812690›Full record

ArticleNature ecology & evolution2017

Young inversion with multiple linked QTLs under selection in a hybrid zone.

Cheng-Ruei Lee, Baosheng Wang, Julius P Mojica, Terezie Mandáková, Kasavajhala V S K Prasad, Jose Luis Goicoechea, Nadeesha Perera, Uffe Hellsten, Hope N Hundley, Jenifer Johnson and 16 more

Erratum issuedAbstract read
In one paragraph

Article in Nature ecology & evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Article
  2. Review
  3. The poplar pathogenMicrobial genomics · 2026
    Article
  4. Article
  5. The Genus Boechera as a Model for Apomixis Research.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genomics of plant speciation.Plant communications · 2023
    Review
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

Cheng-Ruei LeeDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.
Baosheng WangDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.
Julius P MojicaDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.
Terezie MandákováPlant Cytogenomics Group, Central European Institute of Technology, Masaryk University, Kamenice 5, Brno CZ-62500, Czech Republic.
Kasavajhala V S K PrasadDepartment of Biology, Colorado State University, Fort Collins, Colorado 80523, USA.
Jose Luis GoicoecheaArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Nadeesha PereraDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.
Uffe HellstenDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Hope N HundleyDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Jenifer JohnsonDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Jane GrimwoodHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Kerrie BarryDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Stephen FaircloughDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Jerry W JenkinsDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Yeisoo YuPhyzen Genomics Institute, Phyzen Inc., Seoul 151-836, South Korea.
Dave KudrnaArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Jianwei ZhangArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Jayson TalagArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Wolfgang GolserArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Kathryn GhattasDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.
M Eric SchranzBiosystematics Group, Wageningen University and Research Center, Droevendaalsesteeg 1, 6708PB Wageningen, The Netherlands.
Rod WingHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Martin A LysakArizona Genomics Institute and BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, Arizona 85721, USA.
Jeremy SchmutzDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Daniel S RokhsarDepartment of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.
Thomas Mitchell-OldsDepartment of Biology, Duke University, Box 90338, Durham, North Carolina 27708, USA.

Funding

Molecular Causes and Fitness Consequences of Complex Trait VariationR01GM086496 · NIGMS · DUKE UNIVERSITY · PI MITCHELL-OLDS, STORRS THOMAS · 2008 to 2017
$2.7M
NIGMS NIH HHS R01 GM086496
6 · The paper itself

Abstract

Fixed chromosomal inversions can reduce gene flow and promote speciation in two ways: by suppressing recombination and by carrying locally favoured alleles at multiple loci. However, it is unknown whether favoured mutations slowly accumulate on older inversions or if young inversions spread because they capture pre-existing adaptive quantitative trait loci (QTLs). By genetic mapping, chromosome painting and genome sequencing, we have identified a major inversion controlling ecologically important traits in Boechera stricta. The inversion arose since the last glaciation and subsequently reached local high frequency in a hybrid speciation zone. Furthermore, the inversion shows signs of positive directional selection. To test whether the inversion could have captured existing, linked QTLs, we crossed standard, collinear haplotypes from the hybrid zone and found multiple linked phenology QTLs within the inversion region. These findings provide the first direct evidence that linked, locally adapted QTLs may be captured by young inversions during incipient speciation.

Identifiers

PMID28812690
PMCPMC5607633

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.