Evidence map›Paper›PMID 28811590›Full record

ArticleScientific reports2017

Structural analysis of Wss1 protein from saccharomyces cerevisiae.

Xiaoyun Yang, Yanhua Li, Zengqiang Gao, Zongqiang Li, Jianhua Xu, Wenjia Wang, Yuhui Dong

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xiaoyun YangSchool of Life Science, University of Science and Technology of China, Hefei, 230026, China.
Yanhua LiBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Science, Beijing, 100049, China.
Zengqiang GaoBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Science, Beijing, 100049, China.
Zongqiang LiKey Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100049, China.
Jianhua XuBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Science, Beijing, 100049, China.
Wenjia WangSchool of Science, Qilu University of Technology, Jinan, 250353, China. wangwenjia@ihep.ac.cn.
Yuhui DongBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Science, Beijing, 100049, China. dongyh@ihep.ac.cn.
Institute of High Energy Physics · CNChinese Academy of Sciences · CNQilu University of Technology · CNUniversity of Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wss1 is a DNA-protein crosslinks (DPCs) repair protein, which is responsible for degradation of the protein components in DPCs. In this investigation, crystal structure of the protease domain from saccharomyces cerevisiae Wss1 (ScWss1) was solved and was compared with the known crystal structure of Schizosaccharomyces prombe Wss1 (SpWss1). It is found that the cleft near zinc ion to be the most conserved core region of Wss1 and that the electronic surface distributions vary greatly between the two homologs. Solution architecture of the full-length ScWss1 was further investigated by small-angle X-ray scattering (SAXS), which indicated the protein contains a flexible region inside. Finally, based on the structural information, a mechanism was proposed about how the enzyme is activated by DNA substrates.

Indexed as

Models, MolecularProtein ConformationAmino Acid SequenceCatalytic DomainCrystallography, X-RayMetalsSaccharomyces cerevisiae ProteinsSolutionsStructure-Activity RelationshipMetalsSaccharomyces cerevisiae ProteinsSolutionsWSS1 protein, S cerevisiae

Identifiers

PMID28811590
PMCPMC5557861
OpenAlexW2744540804

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.