Evidence map›Paper›PMID 28811219›Full record

ArticleDevelopmental biology2017

Trinucleotide repeat containing 6c (TNRC6c) is essential for microvascular maturation during distal airspace sacculation in the developing lung.

Hua Guo, Yana Kazadaeva, Fabian E Ortega, Narasimaswamy Manjunath, Tushar J Desai

Open access · hybridAbstract read
In one paragraph

Article in Developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Frontiers in genetics · 2022
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Hua GuoCenter of Emphasis in Infectious Disease, Department of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX 79905, United States.
Yana KazadaevaDepartment of Internal Medicine, Division of Pulmonary and Critical Care, Stanford University School of Medicine, Stanford, CA 94305, United States.
Fabian E OrtegaDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305, United States.
Narasimaswamy ManjunathCenter of Emphasis in Infectious Disease, Department of Biomedical Sciences, Texas Tech University Health Sciences Center, El Paso, TX 79905, United States.
Tushar J DesaiDepartment of Internal Medicine, Division of Pulmonary and Critical Care, Stanford University School of Medicine, Stanford, CA 94305, United States. Electronic address: tdesai@stanford.edu.
Stanford University · USTexas Tech University Health Sciences Center · US

Funding

RNA INTERFERENCE AS A WEAPON AGAINST BIOTERRORISMU19AI056900 · NIAID · IMMUNE DISEASE INSTITUTE, INC. · PI LIEBERMAN, JUDY · 2003 to 2007
$11.9M
Single Cell Profiling and In Vivo Cellular Interrogation of Alveolar Stem CellsR56HL127471 · NHLBI · STANFORD UNIVERSITY · PI DESAI, TUSHAR JASUBHAI · 2015 to 2015
$403k
NHLBI NIH HHS R56 HL127471NIAID NIH HHS U19 AI056900
6 · The paper itself

Abstract

GW182 (also known asTNRC6) family members are critically involved in the final effector phase of miRNA-mediated mRNA repression. The three mammalian paralogs, TNRC6a, b and c, are thought to be redundant based on Argonaute (Ago) binding, tethering assays, and RNAi silencing of individual members in cell lines. To test this idea, we generated TNRC6a, b and c knockout mice. TNRC6a mutants die at mid-gestation, while b- and c- deleted mice are born at a Mendelian ratio. However, the majority of TNRC6b and all TNRC6c mutants die within 24h after birth, the latter with respiratory failure. Necropsy of TNRC6c mutants revealed normal-appearing airways that give rise to abnormally thick-walled distal gas exchange sacs. Immunohistological analysis of mutant lungs demonstrated a normal distribution of bronchiolar and alveolar cells, indicating that loss of TNRC6c did not abrogate epithelial cell differentiation. The cellular kinetics and relative proportions of endothelial, epithelial, and mesenchymal cells were also not altered. However, the underlying capillary network was simplified and endothelial cells had failed to become tightly apposed to the surface epithelium in TNRC6c mutants, presumably causing the observed respiratory failure. TGFβ family mutant mice exhibit a similar lung phenotype of thick-walled air sacs and neonatal lethality, and qRT-PCR confirmed dynamic downregulation of TGFβ1 and TGFβR2 in TNRC6c mutant lungs during sacculation. VEGFR, but not VEGF-A ligand, was also lower, likely reflecting the overall reduced capillary density in TNRC6c mutants. Together, these results demonstrate that GW182 paralogs are not functionally redundant in vivo. Surprisingly, despite regulating a general cellular process, TNRC6c is selectively required only in the distal lung and not until late in gestation for proper expression of the TGFβ family genes that drive sacculation. These results imply a complex and indirect mode of regulation of sacculation by TNRC6c, mediated in part by dynamic transcriptional repression of an inhibitor of TGFβ family gene expression.

Indexed as

OrganogenesisAnimalsAutoantigensCell DifferentiationEpithelial CellsGasesGene DeletionGene Expression Regulation, DevelopmentalGerm CellsLungMesodermMiceMice, KnockoutMicrovesselsReproducibility of ResultsRNA-Binding ProteinsAutoantigensGasesRNA-Binding ProteinsTransforming Growth Factor betatrinucleotide repeat containing 6a protein, mouseVascular Endothelial Growth Factor ALung alveolar developmentMicrovascular immaturityMiRNASacculationTGFβTNRC6

Identifiers

PMID28811219
PMCPMC5634525
OpenAlexW2749738155

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.