Evidence map›Paper›PMID 28809985›Full record

ArticleLab on a chip2017

A magnetic micropore chip for rapid (<1 hour) unbiased circulating tumor cell isolation and in situ RNA analysis.

Jina Ko, Neha Bhagwat, Stephanie S Yee, Taylor Black, Colleen Redlinger, Janae Romeo, Mark O'Hara, Arjun Raj, Erica L Carpenter, Ben Z Stanger and 1 more

Abstract read
In one paragraph

Article in Lab on a chip, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jina KoDepartment of Bioengineering, School of Engineering and Applied Sciences, University of Pennsylvania, Philadelphia, Pennsylvania, USA. daveissadore@gmail.com.
Neha Bhagwat
Stephanie S Yee
Taylor Black
Colleen Redlinger
Janae Romeo
Mark O'Hara
Arjun Raj
Erica L Carpenter
Ben Z Stanger
David Issadore

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Robert H. Vonderheide · 1985 to 2026
$222.3M
A vascularized 3D biomimetic for islet function and physiologyUC4DK104196 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI CHEN, CHRISTOPHER S, GADUE, PAUL J · 2014 to 2016
$5.1M
Mechanisms of bile duct reprogrammingR01DK083355 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI GROMPE, MARKUS, STANGER, BEN Z · 2009 to 2020
$4.3M
Engineering and visualizing genome folding at high spatiotemporal resolutionU01HL129998 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BLOBEL, GERD A, PHILLIPS-CREMINS, JENNIFER ELIZABETH · 2015 to 2019
$4.2M
Real-time monitoring of circulating pancreatic tumor cells and clustersR01CA207643 · NCI · UNIVERSITY OF PENNSYLVANIA · PI CARPENTER, ERICA · 2016 to 2021
$2.3M
The role of DCLK1 in the initiation of pancreatic ductal adenocarcinomaR01CA182869 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HOUCHEN, COURTNEY WAYNE · 2015 to 2019
$1.7M
Nanomagnetic isolation and sensing for mobile HIV-1 self-testingR61AI147406 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ISSADORE, DAVID AARON · 2019 to 2021
$1.4M
Validation and development of single nucleotide variant RNA FISH in single cells in culture and tissueR33EB019767 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI RAJ, ARJUN · 2014 to 2016
$1.1M
Rapid unbiased isolation and in situ RNA analysis of circulating tumor cells using a magnetic micropore-based diagnostic chipR33CA206907 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ISSADORE, DAVID AARON · 2017 to 2019
$1.1M
A micro Hall chip for circulating microvesicle based cancer monitoringR21CA182336 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ISSADORE, DAVID AARON · 2014 to 2016
$664k
NCI NIH HHS P30 CA016520NCI NIH HHS R01 CA182869NCI NIH HHS R01 CA207643NCI NIH HHS R21 CA182336NCI NIH HHS R33 CA206907NHLBI NIH HHS U01 HL129998NIAID NIH HHS R61 AI147406NIBIB NIH HHS R33 EB019767NIDDK NIH HHS R01 DK083355NIDDK NIH HHS UC4 DK104196
6 · The paper itself

Abstract

The use of microtechnology for the highly selective isolation and sensitive detection of circulating tumor cells has shown enormous promise. One challenge for this technology is that the small feature sizes - which are the key to this technology's performance - can result in low sample throughput and susceptibility to clogging. Additionally, conventional molecular analysis of CTCs often requires cells to be taken off-chip for sample preparation and purification before analysis, leading to the loss of rare cells. To address these challenges, we have developed a microchip platform that combines fast, magnetic micropore based negative immunomagnetic selection (>10 mL h

Indexed as

AnimalsBiomarkers, TumorDisease Models, AnimalHumansMagnetite NanoparticlesMiceMicrofluidic Analytical TechniquesNeoplastic Cells, CirculatingPancreatic NeoplasmsRNA, MessengerBiomarkers, TumorMagnetite NanoparticlesRNA, Messenger

Identifiers

PMID28809985
PMCPMC5612367

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.