Evidence map›Paper›PMID 28808059›Full record

ArticleThe Journal of biological chemistry2017

Linchpin DNA-binding residues serve as go/no-go controls in the replication factor C-catalyzed clamp-loading mechanism.

Juan Liu, Yayan Zhou, Manju M Hingorani

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. ThebioRxiv : the preprint server for biology · 2026
    Article
  4. Structure of the human CTF18-RFC clamp loader bound to PCNA.bioRxiv : the preprint server for biology · 2025
    Article
  5. Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Structure of the human clamp loader reveals an autoinhibited conformation of a substrate-bound AAA+ switch.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Juan LiuFrom the Department of Molecular Biology and Biochemistry, Wesleyan University, Middletown, Connecticut 06459.
Yayan ZhouFrom the Department of Molecular Biology and Biochemistry, Wesleyan University, Middletown, Connecticut 06459.
Manju M HingoraniFrom the Department of Molecular Biology and Biochemistry, Wesleyan University, Middletown, Connecticut 06459 mhingorani@wesleyan.edu.ORCID 0000-0003-3133-4495
Wesleyan University · US

Funding

Investigation of defective allosteric signaling as a basis for DNA mismatch repair malfunction in Lynch cancer syndromeR15GM114743 · NIGMS · WESLEYAN UNIVERSITY · PI HINGORANI, MANJU M · 2015 to 2015
$409k
NIGMS NIH HHS R15 GM114743
6 · The paper itself

Abstract

DNA polymerases depend on circular sliding clamps for processive replication. Clamps must be loaded onto primer-template DNA (ptDNA) by clamp loaders that open and close clamps around ptDNA in an ATP-fueled reaction. All clamp loaders share a core structure in which five subunits form a spiral chamber that binds the clamp at its base in a twisted open form and encloses ptDNA within, while binding and hydrolyzing ATP to topologically link the clamp and ptDNA. To understand how clamp loaders perform this complex task, here we focused on conserved arginines that might play a central coordinating role in the mechanism because they can alternately contact ptDNA or Walker B glutamate in the ATPase site and lie close to the clamp loader-clamp-binding interface. We mutated Arg-84, Arg-88, and Arg-101 in the ATPase-active B, C, and D subunits of

Indexed as

BiocatalysisAdenosine TriphosphateDNA-Directed DNA PolymeraseDNA, FungalHydrolysisModels, MolecularProliferating Cell Nuclear AntigenProtein BindingProtein ConformationReplication Protein CSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStructure-Activity RelationshipAdenosine TriphosphateDNA-Directed DNA PolymeraseDNA, FungalProliferating Cell Nuclear AntigenReplication Protein CSaccharomyces cerevisiae ProteinsATPaseclamp loaderDNA replicationpre-steady-state kineticsproliferating cell nuclear antigen (PCNA)replication factor C (RFC)

Identifiers

PMID28808059
PMCPMC5612119
OpenAlexW2747545869

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.