Evidence map›Paper›PMID 28808024›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Structural and functional studies of pyruvate carboxylase regulation by cyclic di-AMP in lactic acid bacteria.

Philip H Choi, Thu Minh Ngoc Vu, Huong Thi Pham, Joshua J Woodward, Mark S Turner, Liang Tong

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 58 citations in OpenAlex.

  1. Regulation of potassium homeostasis inFrontiers in microbiology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Bacterial cell volume regulation and the importance of cyclic di-AMP.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  8. Anemoside B4, a new pyruvate carboxylase inhibitor, alleviates colitis by reprogramming macrophage function.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Biosynthetic Pathway and Metabolic Engineering of Succinic Acid.Frontiers in bioengineering and biotechnology · 2022
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Philip H ChoiDepartment of Biological Sciences, Columbia University, New York, NY 10027.
Thu Minh Ngoc VuSchool of Agriculture and Food Sciences, University of Queensland, Brisbane, QLD 4072, Australia.
Huong Thi PhamSchool of Agriculture and Food Sciences, University of Queensland, Brisbane, QLD 4072, Australia.
Joshua J WoodwardDepartment of Microbiology, University of Washington, Seattle, WA 98195.
Mark S TurnerSchool of Agriculture and Food Sciences, University of Queensland, Brisbane, QLD 4072, Australia.ORCID 0000-0003-2770-852X
Liang TongDepartment of Biological Sciences, Columbia University, New York, NY 10027; ltong@columbia.edu.ORCID 0000-0002-0563-6468
The University of Queensland · AUColumbia University · USUniversity of Washington · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Listeria monocytogenes physiology and host pathogen interactionsR01AI116669 · NIAID · UNIVERSITY OF WASHINGTON · PI WOODWARD, JOSHUA · 2015 to 2024
$4.4M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Replacement of an aging X-ray diffraction system for protein crystallographyS10OD012018 · OD · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI TONG, LIANG · 2012 to 2012
$405k
NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI116669NIGMS NIH HHS P41 GM103403NIGMS NIH HHS T32 GM007367NIH HHS S10 OD012018
6 · The paper itself

Abstract

Cyclic di-3',5'-adenosine monophosphate (c-di-AMP) is a broadly conserved bacterial second messenger that has been implicated in a wide range of cellular processes. Our earlier studies showed that c-di-AMP regulates central metabolism in

Indexed as

Adenosine MonophosphateAspartic AcidBacterial ProteinsBinding SitesCrystallography, X-RayCyclic AMPDinucleoside PhosphatesLactobacillalesLactococcus lactisProtein ConformationPyruvate CarboxylaseSecond Messenger SystemsStructure-Activity RelationshipAdenosine MonophosphateAspartic AcidBacterial ProteinsCyclic AMPcyclic diadenosine phosphateDinucleoside PhosphatesPyruvate Carboxylaseaspartate biosynthesiscyclic di-AMPpyruvate carboxylase

Identifiers

PMID28808024
PMCPMC5584425
OpenAlexW2748476765

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.