Evidence map›Paper›PMID 28806901›Full record

ArticleBMC medical genetics2017

Polymorphism rs189037C > T in the promoter region of the ATM gene may associate with reduced risk of T2DM in older adults in China: a case control study.

Xiang Ding, Qiukui Hao, Ming Yang, Tie Chen, Shanping Chen, Jirong Yue, Sean X Leng, Birong Dong

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Mapping novel QTL and fine mapping of previously identified QTL associated with glucose tolerance using the collaborative cross mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Xiang DingCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China.
Qiukui HaoCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China.
Ming YangCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China.
Tie ChenInstitute of Molecular Medicine, Health Science Center, Shenzhen University, Shenzhen, 518060, China.
Shanping ChenCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China.
Jirong YueCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China. yuejirong11@hotmail.com.
Sean X LengDivision of Geriatric Medicine and Gerontology, Department of Medicine, Johns Hopkins University School of Medicine, 5501 Hopkins Bayview Circle, Baltimore, MD, 21224, USA.
Birong DongCenter of Gerontology and Geriatrics, West China Hospital, Sichuan University, NO. 37, Guoxuexiang, Chengdu, Sichuan, 610041, China. birongdong@163.com.ORCID 0000-0001-9795-174X
Sichuan University · CNJohns Hopkins University · USShenzhen University Health Science Center · CN

Funding

Influenza vaccine failure in adults over age 75: role of chronic CMV infectionR01AI108907 · NIAID · JOHNS HOPKINS UNIVERSITY · PI LENG, SEAN XIAO · 2014 to 2018
$2.8M
Chronic CMV infection in the elderly: diagnosis and link to chronic inflammationR21AG043874 · NIA · JOHNS HOPKINS UNIVERSITY · PI LENG, SEAN XIAO · 2013 to 2014
$446k
NIAID NIH HHS R01 AI108907NIA NIH HHS R21 AG043874
6 · The paper itself

Abstract

backgroundRecent evidence indicates that ataxia telangiectasia mutated (ATM) is a cytoplasmic protein that involves in insulin signaling pathways. When ATM gene is mutated, this event appears to contribute to the development of insulin resistance and type 2 diabetes mellitus (T2DM). Up to date, little information about the relationship between ATM gene polymorphism and T2DM is available. This study aimed to explore potential association between a genetic variant [single nucleotide polymorphism (SNP), i.e. rs189037C > T] in the ATM promoter region and T2DM in older adults in China.

methodsWe conducted a 1:1 age- and sex-matched case-control study. It enrolled 160 patients including 80 type 2 diabetic and 80 nondiabetic patients who were aged 60 years and above. Genotyping of the polymorphism rs189037 in the promoter of the ATM gene was performed using polymerase chain reaction-restriction fragment length polymorphism. Chi-square test or Fisher's exact test (when an expected cell count was <5) and unpaired Student's t test were used for categorical and continuous variables, respectively. Logistic regression was used to estimate odds ratio (OR) and 95% confidence interval (CI) with adjustment for factors associated with T2DM.

resultsSignificant association was found between the genotypes of the ATM rs189037 polymorphism and T2DM (P = 0.037). The frequency of CT genotype is much higher in patients without T2DM than in diabetics (60.0% versus 40.0%, P = 0.012). After adjustment of the major confounding factors, such difference remained significant (OR for non-T2DM is 2.62, 95%CI = 1.05-6.53, P = 0.038). Similar effect of CT genotype on T2DM was observed in male population (adjusted: OR = 0.27, 95%CI = 0.09-0.84, P = 0.024). In addition, the percentage of TT genotype in diabetics with coronary artery disease (CAD) was considerably lower than in those without CAD (17.9% versus 61.5%, P = 0.004).

conclusionsOur study suggests that the ATM rs189037 polymorphism is associated with reduced risk of T2DM in older adult population in China. Specifically, CT heterozygote seems to be associated with a lower risk of T2DM than CC or TT genotype, especially in male older adults. Moreover, TT genotype may reduce the risk of CAD in diabetic patients.

Indexed as

Polymorphism, Single NucleotideAgedAged, 80 and overAsian PeopleAtaxia Telangiectasia Mutated ProteinsCase-Control StudiesChinaDiabetes Mellitus, Type 2FemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedAtaxia Telangiectasia Mutated ProteinsAtaxia telangiectasia mutatedCoronary artery diseasers189037Single nucleoside polymorphismType 2 diabetes mellitus

Identifiers

PMID28806901
PMCPMC5557265
OpenAlexW2748006448

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.