Evidence map›Paper›PMID 28806172›Full record

ArticleeLife2017

Mobilization of LINE-1 retrotransposons is restricted by

Marie MacLennan, Marta García-Cañadas, Judith Reichmann, Elena Khazina, Gabriele Wagner, Christopher J Playfoot, Carmen Salvador-Palomeque, Abigail R Mann, Paula Peressini, Laura Sanchez and 8 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
20.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 74 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 4 countries.

Marie MacLennanMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0001-8265-7003
Marta García-CañadasCentro de Genómica e Investigación Oncológica (GENYO), Pfizer-Universidad de Granada-Junta de Andalucía, PTS Granada, Granada, Spain.
Judith ReichmannMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Elena KhazinaDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Gabriele WagnerDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Christopher J PlayfootMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Carmen Salvador-PalomequeCentro de Genómica e Investigación Oncológica (GENYO), Pfizer-Universidad de Granada-Junta de Andalucía, PTS Granada, Granada, Spain.
Abigail R MannMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Paula PeressiniCentro de Genómica e Investigación Oncológica (GENYO), Pfizer-Universidad de Granada-Junta de Andalucía, PTS Granada, Granada, Spain.
Laura SanchezCentro de Genómica e Investigación Oncológica (GENYO), Pfizer-Universidad de Granada-Junta de Andalucía, PTS Granada, Granada, Spain.
Karen DobieMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
David ReadMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Chao-Chun HungMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Ragnhild EskelandDepartment of Biosciences, University of Oslo, Oslo, Norway.ORCID 0000-0003-2789-3171
Richard R MeehanMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Oliver WeichenriederDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.ORCID 0000-0001-5818-6248
Jose Luis García-PérezMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-8132-9849
Ian R AdamsMRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0001-8838-1271
Institute of Genetics and Cancer · GBPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ESMax Planck Institute for Developmental Biology · DEOslo University Hospital · NO

Funding

Howard Hughes Medical Institute IECS-55007420Medical Research Council MC_PC_U127574433Medical Research Council MC_PC_U127580973Wellcome TrustWellcome Trust ISSF3
6 · The paper itself

Abstract

Mobilization of retrotransposons to new genomic locations is a significant driver of mammalian genome evolution, but these mutagenic events can also cause genetic disorders. In humans, retrotransposon mobilization is mediated primarily by proteins encoded by LINE-1 (L1) retrotransposons, which mobilize in pluripotent cells early in development. Here we show that TEX19.1, which is induced by developmentally programmed DNA hypomethylation, can directly interact with the L1-encoded protein L1-ORF1p, stimulate its polyubiquitylation and degradation, and restrict L1 mobilization. We also show that TEX19.1 likely acts, at least in part, through promoting the activity of the E3 ubiquitin ligase UBR2 towards L1-ORF1p. Moreover, loss of

Indexed as

Long Interspersed Nucleotide ElementsRecombination, GeneticAnimalsGene Knockout TechniquesMiceMouse Embryonic Stem CellsNuclear ProteinsProtein BindingProteolysisRNA-Binding ProteinsUbiquitinationUbiquitin-Protein LigasesECAT11 protein, mouseNuclear ProteinsRNA-Binding ProteinsTex19 protein, mouseUbiquitin-Protein LigasesUBR2 protein, mousedevelopmental biologyevolutionary biologygenomicsgermlinehumanL1LINE-1mousepluripotentretrotransposonstem cellsTex19.1

Identifiers

PMID28806172
PMCPMC5570191
OpenAlexW2746529741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.