Evidence map›Paper›PMID 28801553›Full record

ArticleScientific reports2017

Dead-end complex, lipid interactions and catalytic mechanism of microsomal glutathione transferase 1, an electron crystallography and mutagenesis investigation.

Qie Kuang, Pasi Purhonen, Johan Ålander, Richard Svensson, Veronika Hoogland, Jens Winerdal, Linda Spahiu, Astrid Ottosson-Wadlund, Caroline Jegerschöld, Ralf Morgenstern and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Qie KuangDepartment of Biosciences and Nutrition, Karolinska Institutet and School of Technology and Health, Royal Institute of Technology, SE-141 83, Huddinge, Sweden.
Pasi PurhonenDepartment of Biosciences and Nutrition, Karolinska Institutet and School of Technology and Health, Royal Institute of Technology, SE-141 83, Huddinge, Sweden.
Johan ÅlanderInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Richard SvenssonInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Veronika HooglandInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Jens WinerdalInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Linda SpahiuInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.ORCID 0000-0001-5086-6767
Astrid Ottosson-WadlundInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Caroline JegerschöldDepartment of Biosciences and Nutrition, Karolinska Institutet and School of Technology and Health, Royal Institute of Technology, SE-141 83, Huddinge, Sweden.
Ralf MorgensternInstitute of Environmental Medicine, Karolinska Institutet, SE-171 77, Stockholm, Sweden.
Hans HebertDepartment of Biosciences and Nutrition, Karolinska Institutet and School of Technology and Health, Royal Institute of Technology, SE-141 83, Huddinge, Sweden. Hans.Hebert@ki.se.ORCID 0000-0002-3220-9402
Karolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsomal glutathione transferase 1 (MGST1) is a detoxification enzyme belonging to the Membrane Associated Proteins in Eicosanoid and Glutathione Metabolism (MAPEG) superfamily. Here we have used electron crystallography of two-dimensional crystals in order to determine an atomic model of rat MGST1 in a lipid environment. The model comprises 123 of the 155 amino acid residues, two structured phospholipid molecules, two aliphatic chains and one glutathione (GSH) molecule. The functional unit is a homotrimer centered on the crystallographic three-fold axes of the unit cell. The GSH substrate binds in an extended conformation at the interface between two subunits of the trimer supported by new in vitro mutagenesis data. Mutation of Arginine 130 to alanine resulted in complete loss of activity consistent with a role for Arginine 130 in stabilizing the strongly nucleophilic GSH thiolate required for catalysis. Based on the new model and an electron diffraction data set from crystals soaked with trinitrobenzene, that forms a dead-end Meisenheimer complex with GSH, a difference map was calculated. The map reveals side chain movements opening a cavity that defines the second substrate site.

Indexed as

AnimalsBinding SitesCrystallographyGlutathioneGlutathione TransferaseMicroscopy, Electron, TransmissionModels, MolecularMutagenesisMutant ProteinsProtein BindingProtein ConformationProtein MultimerizationRatsGlutathioneGlutathione Transferasemicrosomal glutathione S-transferase-IMutant Proteins

Identifiers

PMID28801553
PMCPMC5554250
OpenAlexW2743640065

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.