Evidence map›Paper›PMID 28800594›Full record

ArticlePloS one2017

Species identification and molecular typing of human Brucella isolates from Kuwait.

Abu S Mustafa, Nazima Habibi, Amr Osman, Faraz Shaheed, Mohd W Khan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Whole-Genome Sequencing of Brucella melitensis Isolates from Kuwait for the Identification of Biovars, Variants, and Relationship within a Biovar.Medical principles and practice : international journal of the Kuwait University, Health Science Centre · 2025
    Article
  3. Review
  4. Review
  5. Whole Genome Sequencing: Applications in Clinical Bacteriology.Medical principles and practice : international journal of the Kuwait University, Health Science Centre · 2024
    Review
  6. Antibiotic Resistance Mediated byAntibiotics (Basel, Switzerland) · 2023
    Article
  7. Genome survey and genetic characterization ofFrontiers in plant science · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Abu S MustafaOMICS Research Unit and Research Core Facility, Heath Sciences Centre, Kuwait University, Jabriya, Kuwait.ORCID http://orcid.org/0000-0002-6074-1041
Nazima HabibiOMICS Research Unit and Research Core Facility, Heath Sciences Centre, Kuwait University, Jabriya, Kuwait.
Amr OsmanOMICS Research Unit and Research Core Facility, Heath Sciences Centre, Kuwait University, Jabriya, Kuwait.
Faraz ShaheedOMICS Research Unit and Research Core Facility, Heath Sciences Centre, Kuwait University, Jabriya, Kuwait.
Mohd W KhanOMICS Research Unit and Research Core Facility, Heath Sciences Centre, Kuwait University, Jabriya, Kuwait.
Kuwait University · KW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brucellosis is a zoonotic disease of major concern in Kuwait and the Middle East. Human brucellosis can be caused by several Brucella species with varying degree of pathogenesis, and relapses are common after apparently successful therapy. The classical biochemical methods for identification of Brucella are time-consuming, cumbersome, and provide information limited to the species level only. In contrast, molecular methods are rapid and provide differentiation at intra-species level. In this study, four molecular methods [16S rRNA gene sequencing, real-time PCR, enterobacterial repetitive intergenic consensus (ERIC)-PCR and multilocus variable-number tandem-repeat analysis (MLVA)-8, MLVA-11 and MLVA-16 were evaluated for the identification and typing of 75 strains of Brucella isolated in Kuwait. 16S rRNA gene sequencing of all isolates showed 90-99% sequence identity with B. melitensis and real-time PCR with genus- and species- specific primers identified all isolates as B. melitensis. The results of ERIC-PCR suggested the existence of 75 ERIC genotypes of B. melitensis with a discriminatory index of 0.997. Cluster classification of these genotypes divided them into two clusters, A and B, diverging at ~25%. The maximum number of genotypes (n = 51) were found in cluster B5. MLVA-8 analysis identified all isolates as B. melitensis, and MLVA-8, MLVA-11 and MLVA-16 typing divided the isolates into 10, 32 and 71 MLVA types, respectively. Furthermore, the combined minimum spanning tree analysis demonstrated that, compared to MLVA types discovered all over the world, the Kuwaiti isolates were a distinct group of MLVA-11 and MLVA-16 types in the East Mediterranean Region.

Indexed as

BrucellaCluster AnalysisConsensus SequenceDNA FingerprintingDNA, IntergenicGene FrequencyGenetic VariationHumansKuwaitMolecular TypingMultilocus Sequence TypingPolymerase Chain ReactionRepetitive Sequences, Nucleic AcidRNA, Ribosomal, 16SSequence Analysis, DNASpecies SpecificityDNA, IntergenicRNA, Ribosomal, 16S

Identifiers

PMID28800594
PMCPMC5553756
OpenAlexW2742984764

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.