Evidence map›Paper›PMID 28798345›Full record

ArticleScientific reports2017

NEDD4-family E3 ligase dysfunction due to PKHD1/Pkhd1 defects suggests a mechanistic model for ARPKD pathobiology.

Jun-Ya Kaimori, Cheng-Chao Lin, Patricia Outeda, Miguel A Garcia-Gonzalez, Luis F Menezes, Erum A Hartung, Ao Li, Guanqing Wu, Hideaki Fujita, Yasunori Sato and 9 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
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  3. Article
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  5. Review
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  7. Review
  8. Pkhd1Journal of molecular medicine (Berlin, Germany) · 2023
    Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Molecular Pathophysiology of Autosomal Recessive Polycystic Kidney Disease.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 5 countries.

Jun-Ya KaimoriDepartment of Nephrology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan. kaimori@att.med.osaka-u.ac.jp.
Cheng-Chao LinNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bldg 31, 9A52, 31 Center Drive, Bethesda, MD20892, USA.
Patricia OutedaUniversity of Maryland School of Medicine, Division of Nephrology, 22S Green St, Baltimore, MD21201, USA.
Miguel A Garcia-GonzalezLaboratorio de Investigacion en Nefroloxia, Complexo Hospitalario Universitario de Santiago, Travesía de Choupana, s/n 15706, Santiago de Compostela, Spain.
Luis F MenezesNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bldg 31, 9A52, 31 Center Drive, Bethesda, MD20892, USA.
Erum A HartungDivision of Nephrology, Children's Hospital of Philadelphia, Perelman School of the University of Pennsylvania, 3401 Civic Center Boulevard, CTRB 9207, Philadelphia, PA, 19104, USA.ORCID 0000-0001-5617-6505
Ao LiCenter of Translational Cancer Research and Therapy, State Key Laboratory of Molecular Oncology, Cancer Hospital and Institute, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China.
Guanqing WuCenter of Translational Cancer Research and Therapy, State Key Laboratory of Molecular Oncology, Cancer Hospital and Institute, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China.
Hideaki FujitaGraduate School of Pharmaceutical Science, Nagasaki International University, 2825-7 Huis Ten Bosch-Cho, Sasebo, Nagasaki, 859-3298, Japan.
Yasunori SatoDepartments of Human Pathology, Kanazawa University Graduate School of Medicine, 13-1 Takara-cho, Kanazawa, 920-8640, Japan.
Yasuni NakanumaDepartment of Pathology, Shizuoka Cancer Center, 1007 Shimonagakubo, Nagaizumi-cho, Sunto-gun, Shizuoka, 411-8777, Japan.
Satoko YamamotoDepartment of Nephrology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Naotsugu IchimaruDepartment of Advanced Technology of Transplantation, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Shiro TakaharaDepartment of Advanced Technology of Transplantation, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yoshitaka IsakaDepartment of Nephrology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Terry WatnickUniversity of Maryland School of Medicine, Division of Nephrology, 22S Green St, Baltimore, MD21201, USA.
Luiz F OnuchicDepartment of Medicine, Division of Nephrology, University of Sao Paulo, Dr. Arnald Ave, 455-Cerqueira Cesar, Sao Paulo, CEP01246903-903, Brazil.
Lisa M Guay-WoodfordChildren's National Health System, 6th Floor Main Hospital, Center 6, 111 Michigan Ave NW, Washington, DC, 20010, USA.
Gregory G GerminoNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bldg 31, 9A52, 31 Center Drive, Bethesda, MD20892, USA. germinogg@niddk.nih.gov.ORCID 0000-0002-3609-5588
The University of Osaka · JPNational Institutes of Health · USChinese Academy of Medical Sciences & Peking Union Medical College · CNUniversity of Maryland, Baltimore · USChildren's Hospital of Philadelphia · USChildren's National · USComplejo Hospitalario Universitario de Santiago · ESKanazawa University · JPNagasaki International University · JPShizuoka Cancer Center · JPUniversidade de São Paulo · BR

Funding

The role of PKD proteins in regulating tubular morphologyZIADK075042 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI GERMINO, GREGORY · 2010 to 2025
$23.3M
Research BaseP30DK090868 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI HUSO, DAVID L · 2010 to 2019
$11.1M
MOLECULAR GENETICS OF HUMAN ARPKDR01DK051259 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI QIAN, FENG · 1996 to 2009
$4.5M
Novel Imaging Biomarkers in Autosomal Recessive Polycystic Kidney DiseaseK23DK109203 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI HARTUNG, ERUM AFTAB · 2016 to 2019
$728k
NIDDK NIH HHS K23 DK109203NIDDK NIH HHS P30 DK090868NIDDK NIH HHS R01 DK051259
6 · The paper itself

Abstract

Autosomal recessive polycystic kidney disease (ARPKD) is an important childhood nephropathy, occurring 1 in 20,000 live births. The major clinical phenotypes are expressed in the kidney with dilatation of the collecting ducts, systemic hypertension, and progressive renal insufficiency, and in the liver with biliary dysgenesis, portal tract fibrosis, and portal hypertension. The systemic hypertension has been attributed to enhanced distal sodium reabsorption in the kidney, the structural defects have been ascribed to altered cellular morphology, and fibrosis to increased TGF-β signaling in the kidney and biliary tract, respectively. The pathogenic mechanisms underlying these abnormalities have not been determined. In the current report, we find that disrupting PKHD1 results in altered sub-cellular localization and function of the C2-WWW-HECT domain E3 family of ligases regulating these processes. We also demonstrate altered activity of RhoA and increased TGF-β signaling and ENaC activity. Linking these phenomena, we found that vesicles containing the PKHD1/Pkhd1 gene product, FPC, also contain the NEDD4 ubiquitin ligase interacting protein, NDFIP2, which interacts with multiple members of the C2-WWW-HECT domain E3 family of ligases. Our results provide a mechanistic explanation for both the cellular effects and in vivo phenotypic abnormalities in mice and humans that result from Pkhd1/PKHD1 mutation.

Indexed as

AnimalsBiomarkersCell LineDisease Models, AnimalEnzyme ActivationGene ExpressionHumansIntracellular SpaceMaleMiceMice, KnockoutMice, TransgenicModels, BiologicalMutationNedd4 Ubiquitin Protein LigasesPolycystic Kidney, Autosomal RecessiveBiomarkersNedd4 Ubiquitin Protein LigasesPKHD1 protein, humanReceptors, Cell Surfacerho GTP-Binding Proteins

Identifiers

PMID28798345
PMCPMC5552802
OpenAlexW2742622781

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.