Evidence map›Paper›PMID 28794415›Full record

ArticleNature communications2017

Living GenoChemetics by hyphenating synthetic biology and synthetic chemistry in vivo.

Sunil V Sharma, Xiaoxue Tong, Cristina Pubill-Ulldemolins, Christopher Cartmell, Emma J A Bogosyan, Emma J Rackham, Enrico Marelli, Refaat B Hamed, Rebecca J M Goss

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Advances in the Study of Halogenated Natural Products.Current topics in medicinal chemistry · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Enzymatic Late-Stage Halogenation of Peptides.Chembiochem : a European journal of chemical biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Peptide stapling by late-stage Suzuki-Miyaura cross-coupling.Beilstein journal of organic chemistry · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Sunil V SharmaSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Xiaoxue TongSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Cristina Pubill-UlldemolinsSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Christopher CartmellSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Emma J A BogosyanSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Emma J RackhamSchool of Chemistry, University of East, Norwich, NR4 7TJ, UK.
Enrico MarelliSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.
Refaat B HamedSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK.ORCID http://orcid.org/0000-0002-9160-9414
Rebecca J M GossSchool of Chemistry, University of St Andrews, North Haugh, St Andrews, KY16 9ST, UK. rjmg@st-andrews.ac.uk.
University of St Andrews · GBUniversity of East Anglia · GB

Funding

European Research Council 614779
6 · The paper itself

Abstract

Marrying synthetic biology with synthetic chemistry provides a powerful approach toward natural product diversification, combining the best of both worlds: expediency and synthetic capability of biogenic pathways and chemical diversity enabled by organic synthesis. Biosynthetic pathway engineering can be employed to insert a chemically orthogonal tag into a complex natural scaffold affording the possibility of site-selective modification without employing protecting group strategies. Here we show that, by installing a sufficiently reactive handle (e.g., a C-Br bond) and developing compatible mild aqueous chemistries, synchronous biosynthesis of the tagged metabolite and its subsequent chemical modification in living culture can be achieved. This approach can potentially enable many new applications: for example, assay of directed evolution of enzymes catalyzing halo-metabolite biosynthesis in living cells or generating and following the fate of tagged metabolites and biomolecules in living systems. We report synthetic biological access to new-to-nature bromo-metabolites and the concomitant biorthogonal cross-coupling of halo-metabolites in living cultures.Coupling synthetic biology and chemical reactions in cells is a challenging task. The authors engineer bacteria capable of generating bromo-metabolites, develop a mild Suzuki-Miyaura cross-coupling reaction compatible with cell growth and carry out the cross-coupling chemistry in live cell cultures.

Indexed as

BacteriaBacterial ProteinsBiological ProductsBiosynthetic PathwaysSynthetic BiologyBacterial ProteinsBiological Products

Identifiers

PMID28794415
PMCPMC5550429
OpenAlexW2739637903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.