Evidence map›Paper›PMID 28793636›Full record

ArticleMaterials (Basel, Switzerland)2015

Molecular Dynamics Simulation of the Effect of Angle Variation on Water Permeability through Hourglass-Shaped Nanopores.

Dai Tang, Longnan Li, Majid Shahbabaei, Yeong-Eun Yoo, Daejoong Kim

Abstract read
In one paragraph

Article in Materials (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dai TangDepartment of Mechanical Engineering, Sogang University, Seoul 04107, Korea. tangdai@sogang.ac.kr.
Longnan LiDepartment of Mechanical Engineering, Sogang University, Seoul 04107, Korea. lilongnan@sogang.ac.kr.
Majid ShahbabaeiDepartment of Mechanical Engineering, Sogang University, Seoul 04107, Korea. majidsh@sogang.ac.kr.
Yeong-Eun YooNano-Mechanical Systems Research Division, Korea Institute of Machinery and Materials, Daejeon 34103, Korea. yeyoo@kimm.re.kr.
Daejoong KimDepartment of Mechanical Engineering, Sogang University, Seoul 04107, Korea. daejoong@sogang.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water transport through aquaporin water channels occurs extensively in cell membranes. Hourglass-shaped (biconical) pores resemble the geometry of these aquaporin channels and therefore attract much research attention. We assumed that hourglass-shaped nanopores are capable of high water permeation like biological aquaporins. In order to prove the assumption, we investigated nanoscale water transport through a model hourglass-shaped pore using molecular dynamics simulations while varying the angle of the conical entrance and the total nanopore length. The results show that a minimal departure from optimized cone angle (e.g., 9° for 30 Å case) significantly increases the osmotic permeability and that there is a non-linear relationship between permeability and the cone angle. The analysis of hydrodynamic resistance proves that the conical entrance helps to reduce the hydrodynamic entrance hindrance. Our numerical and analytical results thus confirm our initial assumption and suggest that fast water transport can be achieved by adjusting the cone angle and length of an hourglass-shaped nanopore.

Indexed as

cone anglehourglass-shaped porehydrodynamic permeabilitymolecular dynamics

Identifiers

PMID28793636
PMCPMC5458919

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.