Evidence map›Paper›PMID 28792954›Full record

ArticlePloS one2017

Variants in calcium voltage-gated channel subunit Alpha1 C-gene (CACNA1C) are associated with sleep latency in infants.

Katri Kantojärvi, Johanna Liuhanen, Outi Saarenpää-Heikkilä, Anna-Liisa Satomaa, Anneli Kylliäinen, Pirjo Pölkki, Julia Jaatela, Auli Toivola, Lili Milani, Sari-Leena Himanen and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Voltage Gated Ion Channels and Sleep.The Journal of membrane biology · 2024
    Review
  3. Article
  4. The role of calcium and CaMKII in sleep.Frontiers in systems neuroscience · 2022
    Review
  5. Review
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Katri KantojärviGenomics and Biomarkers Unit, National Institute for Health and Welfare, Helsinki, Finland.ORCID http://orcid.org/0000-0002-1294-0310
Johanna LiuhanenGenomics and Biomarkers Unit, National Institute for Health and Welfare, Helsinki, Finland.
Outi Saarenpää-HeikkiläHuman Information Processing-laboratory, University of Tampere, Tampere, Finland.
Anna-Liisa SatomaaDepartment of Clinical Neurophysiology, Tampere University Hospital, Medical Imaging Centre and Hospital Pharmacy, Pirkanmaa Hospital District, Tampere, Finland.
Anneli KylliäinenSchool of Social Sciences and Humanities/Psychology, University of Tampere, Tampere, Finland.
Pirjo PölkkiDepartment of Social Sciences, University of Eastern Finland, Kuopio, Finland.
Julia JaatelaGenomics and Biomarkers Unit, National Institute for Health and Welfare, Helsinki, Finland.
Auli ToivolaGenomics and Biomarkers Unit, National Institute for Health and Welfare, Helsinki, Finland.
Lili MilaniThe Estonian Genome Center, University of Tartu, Tartu, Estonia.
Sari-Leena HimanenDepartment of Clinical Neurophysiology, Tampere University Hospital, Medical Imaging Centre and Hospital Pharmacy, Pirkanmaa Hospital District, Tampere, Finland.
Tarja Porkka-HeiskanenInstitute of Biomedicine/Physiology, University of Helsinki, Helsinki, Finland.
Juulia PaavonenChild and Adolescent Mental Health, National Institute for Health and Welfare, Helsinki, Finland.
Tiina PaunioGenomics and Biomarkers Unit, National Institute for Health and Welfare, Helsinki, Finland.
University of Helsinki · FITampere University · FIFinnish Institute for Health and Welfare · FIPirkanmaa Hospital District · FIUniversity of Eastern Finland · FIUniversity of Tartu · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic variants in CACNA1C (calcium voltage-gated channel subunit alpha1 C) are associated with bipolar disorder and schizophrenia where sleep disturbances are common. In an experimental model, Cacna1c has been found to modulate the electrophysiological architecture of sleep. There are strong genetic influences for consolidation of sleep in infancy, but only a few studies have thus far researched the genetic factors underlying the process. We hypothesized that genetic variants in CACNA1C affect the regulation of sleep in early development. Seven variants that were earlier associated (genome-wide significantly) with psychiatric disorders at CACNA1C were selected for analyses. The study sample consists of 1086 infants (520 girls and 566 boys) from the Finnish CHILD-SLEEP birth cohort (genotyped by Illumina Infinium PsychArray BeadChip). Sleep length, latency, and nightly awakenings were reported by the parents of the infants with a home-delivered questionnaire at 8 months of age. The genetic influence of CACNA1C variants on sleep in infants was examined by using PLINK software. Three of the examined CACNA1C variants, rs4765913, rs4765914, and rs2239063, were associated with sleep latency (permuted P<0.05). There was no significant association between studied variants and night awakenings or sleep duration. CACNA1C variants for psychiatric disorders were found to be associated with long sleep latency among 8-month-old infants. It remains to be clarified whether the findings refer to defective regulation of sleep, or to distractibility of sleep under external influences.

Indexed as

Bipolar DisorderCalcium Channels, L-TypeChild, PreschoolFemaleFinlandGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInfantMalePolymorphism, Single NucleotidePolysomnographySchizophreniaSleepSleep Wake DisordersSurveys and QuestionnairesCACNA1C protein, humanCalcium Channels, L-Type

Identifiers

PMID28792954
PMCPMC5549883
OpenAlexW2744004744

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.