Evidence map›Paper›PMID 28791894›Full record

ReviewFuture medicinal chemistry2017

Decoding HIV resistance: from genotype to therapy.

Irene T Weber, Robert W Harrison

Abstract readReview
In one paragraph

Review in Future medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Antiviral therapies: advances and perspectives.Fundamental & clinical pharmacology · 2021
    Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Irene T WeberDepartment of Biology, Georgia State University, PO Box 4010, Atlanta, GA 30302-4010, USA.
Robert W HarrisonDepartment of Computer Science, Georgia State University, Atlanta, GA 30303, USA.

Funding

Inhibition of Resistant Variants of HIV ProteaseU01GM062920 · NIGMS · GEORGIA STATE UNIVERSITY · PI HARRISON, ROBERT WILSON, WEBER, IRENE T · 2013 to 2018
$2.1M
NIGMS NIH HHS U01 GM062920
6 · The paper itself

Abstract

Genetic variation in HIV poses a major challenge for prevention and treatment of the AIDS pandemic. Resistance occurs by mutations in the target proteins that lower affinity for the drug or alter the protein dynamics, thereby enabling viral replication in the presence of the drug. Due to the prevalence of drug-resistant strains, monitoring the genotype of the infecting virus is recommended. Computational approaches for predicting resistance from genotype data and guiding therapy are discussed. Many prediction methods rely on rules derived from known resistance-associated mutations, however, statistical or machine learning can improve the classification accuracy and assess unknown mutations. Adding classifiers such as information on the atomic structure of the protein can further enhance the predictions.

Indexed as

Anti-Retroviral AgentsBinding SitesDrug Resistance, ViralGenotypeHIV-1HIV InfectionsHIV IntegraseHIV ProteaseHIV Reverse TranscriptaseHumansMolecular Dynamics SimulationAnti-Retroviral AgentsHIV IntegraseHIV ProteaseHIV Reverse Transcriptaseantiretroviral therapydrug resistance mutationsgenotype interpretationHIV/AIDSintegrase strand transfer inhibitornon-nucleoside reverse transcriptase inhibitornucleoside reverse transcriptase inhibitorprotease inhibitorsupervised machine learning

Identifiers

PMID28791894
PMCPMC5694023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.