Evidence map›Paper›PMID 28791475›Full record

ArticleDevelopment genes and evolution2017

Regulation and function of odd-paired in Tribolium segmentation.

Chong Pyo Choe, Frank Stellabotte, Susan J Brown

Abstract read
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Article in Development genes and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. EvoDevo · 2020
    Article
  5. Evidence of multifaceted functions of codon usage in translation within the model beetle Tribolium castaneum.DNA research : an international journal for rapid publication of reports on genes and genomes · 2019
    Article
  6. Shifting roles ofDevelopment (Cambridge, England) · 2019
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chong Pyo ChoeDivision of Life Science, Gyeongsang National University, Jinju, 52828, Republic of Korea. cpchoe@gnu.ac.kr.ORCID 0000-0003-0254-9438
Frank StellabotteSchool of Allied Health, Business, and STEM, Middlesex Community College, Middletown, CT, USA.
Susan J BrownDivision of Biology, Kansas State University, Manhattan, KS, USA.

Funding

GENETIC CONTROL OF SEGMENTATIONR01HD029594 · NICHD · KANSAS STATE UNIVERSITY · PI BROWN, SUSAN J. · 1992 to 2011
$3.4M
Ministry of Oceans and Fisheries, Korea 20140428NICHD NIH HHS R01 HD029594NIH HHS R01-HD29594
6 · The paper itself

Abstract

The pair-rule gene odd-paired (opa) is required for the patterning of alternate segment boundaries in the early Drosophila embryo. Mutant phenotypes of opa display a typical pair-rule phenotype in which most of each odd-numbered denticle belt is eliminated. However, among the nine Drosophila pair-rule genes, opa is the only gene that is not expressed in stripes with double segmental periodicity; its transcript and protein are expressed in a broad domain within segmenting embryos. While expression patterns of orthologs of opa have been analyzed in several arthropod species, their regulation and function in segmentation were largely unknown. Here, we analyzed the expression patterns, regulation, and function of the Tribolium ortholog of opa (Tc-opa). Tc-opa is expressed in segmental stripes in the early stages of segmentation and then is expressed in a broad domain at the growth zone of elongating germbands where new segments form. This broad expression of Tc-opa is processed into segmental stripes once the trunk has become segmented. Tc-opa expression is regulated positively and negatively by even-skipped and odd-skipped, respectively. However, knock-down of Tc-opa does not affect embryonic segmentation. Our findings suggest that Tc-opa expression is regulated by the pair-rule gene network even though its requirement for segmentation is uncertain in Tribolium.

Indexed as

Body PatterningGene Expression Regulation, DevelopmentalAmino Acid SequenceAnimalsEmbryo, NonmammalianInsect ProteinsPhylogenySequence HomologyTriboliumInsect ProteinsInsect segmentationOdd-pairedPair-rule geneTribolium

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.