Evidence map›Paper›PMID 28791133›Full record

ArticleRoyal Society open science2017

Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates.

Jane Melville, Margaret L Haines, Katja Boysen, Luke Hodkinson, Andrzej Kilian, Katie L Smith Date, Dominique A Potvin, Kirsten M Parris

Open access · goldAbstract read
In one paragraph

Article in Royal Society open science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
10.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 115 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jane MelvilleDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.ORCID 0000-0002-9994-6423
Margaret L HainesDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.
Katja BoysenDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.
Luke HodkinsonDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.
Andrzej KilianDiversity Arrays Technology, University of Canberra, Bruce, Australian Capital Territory 2617, Australia.
Katie L Smith DateDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.
Dominique A PotvinDepartment of Sciences, Museum Victoria, Carlton, Victoria 3052, Australia.ORCID 0000-0001-9296-9297
Kirsten M ParrisSchool of Ecosystem and Forest Sciences, The University of Melbourne, Parkville, Victoria 3010, Australia.
Museums Victoria · AUThe University of Melbourne · AUUniversity of Canberra · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Next-generation sequencing (NGS) approaches are increasingly being used to generate multi-locus data for phylogeographic and evolutionary genetics research. We detail the applicability of a restriction enzyme-mediated genome complexity reduction approach with subsequent NGS (DArTseq) in vertebrate study systems at different evolutionary and geographical scales. We present two case studies using SNP data from the DArTseq molecular marker platform. First, we used DArTseq in a large phylogeographic study of the agamid lizard

Indexed as

DArTseqgenomicshybridizationphylogeographypopulation geneticsSNPs

Identifiers

PMID28791133
PMCPMC5541528
OpenAlexW2737039037

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.