Evidence map›Paper›PMID 28790814›Full record

ArticleInternational journal of chronic obstructive pulmonary disease2017

Bacteriological incidence in pneumonia patients with pulmonary emphysema: a bacterial floral analysis using the 16S ribosomal RNA gene in bronchoalveolar lavage fluid.

Keisuke Naito, Kei Yamasaki, Kazuhiro Yatera, Kentaro Akata, Shingo Noguchi, Toshinori Kawanami, Kazumasa Fukuda, Takashi Kido, Hiroshi Ishimoto, Hiroshi Mukae

Open access · goldAbstract readComparative Study
In one paragraph

Article in International journal of chronic obstructive pulmonary disease, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. iScience · 2022
    Article
  6. Article
  7. Review
  8. The optimal duration of antimicrobial therapy for lower respiratory tract infection in patients with neuromuscular disorders based on a clone library analysis of the bacterial 16S rRNA gene sequence.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020
    Article
  9. Review
  10. Blood eosinophil count as a prognostic biomarker in COPD.International journal of chronic obstructive pulmonary disease
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Keisuke NaitoDepartment of Respiratory Medicine.
Kei YamasakiDepartment of Respiratory Medicine.
Kazuhiro YateraDepartment of Respiratory Medicine.
Kentaro AkataDepartment of Respiratory Medicine.
Shingo NoguchiDepartment of Respiratory Medicine.
Toshinori KawanamiDepartment of Respiratory Medicine.
Kazumasa FukudaDepartment of Microbiology, University of Occupational and Environmental Health, Japan, Kitakyushu City, Fukuoka.
Takashi KidoDepartment of Respiratory Medicine.
Hiroshi IshimotoSecond Department of Internal Medicine, Nagasaki University School of Medicine, Nagasaki City, Nagasaki, Japan.
Hiroshi MukaeSecond Department of Internal Medicine, Nagasaki University School of Medicine, Nagasaki City, Nagasaki, Japan.
University of Occupational and Environmental Health Japan · JPNagasaki University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pulmonary emphysema is an important radiological finding in chronic obstructive pulmonary disease patients, but bacteriological differences in pneumonia patients according to the severity of emphysematous changes have not been reported. Therefore, we evaluated the bacteriological incidence in the bronchoalveolar lavage fluid (BALF) of pneumonia patients using cultivation and a culture-independent molecular method. Japanese patients with community-acquired pneumonia (83) and healthcare-associated pneumonia (94) between April 2010 and February 2014 were evaluated. The BALF obtained from pneumonia lesions was evaluated by both cultivation and a molecular method. In the molecular method, ~600 base pairs of bacterial 16S ribosomal RNA genes in the BALF were amplified by polymerase chain reaction, and clone libraries were constructed. The nucleotide sequences of 96 randomly selected colonies were determined, and a homology search was performed to identify the bacterial species. A qualitative radiological evaluation of pulmonary emphysema based on chest computed tomography (CT) images was performed using the Goddard classification. The severity of pulmonary emphysema based on the Goddard classification was none in 47.4% (84/177), mild in 36.2% (64/177), moderate in 10.2% (18/177), and severe in 6.2% (11/177). Using the culture-independent molecular method,

Indexed as

RibotypingAgedAged, 80 and overBacteriaBronchoalveolar Lavage FluidCommunity-Acquired InfectionsCross InfectionDNA, BacterialFemaleHumansIncidenceJapanLungMaleMiddle AgedPneumonia, BacterialDNA, BacterialRNA, Ribosomal, 16Schronic obstructive pulmonary diseaseclone library methodGoddard classificationmicrofloramolecular methodMoraxella catarrhalisphylotype

Identifiers

PMID28790814
PMCPMC5530061
OpenAlexW2737761500

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.