Evidence map›Paper›PMID 28784816›Full record

ArticleJournal of bacteriology2017

Opsin-Mediated Inhibition of Bacterioruberin Synthesis in Halophilic Archaea.

Ronald F Peck, Alexandru M Pleşa, Serena M Graham, David R Angelini, Emily L Shaw

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. EngineeringFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ronald F PeckDepartment of Biology, Colby College, Waterville, Maine, USA ronald.peck@colby.edu.
Alexandru M PleşaDepartment of Biology, Colby College, Waterville, Maine, USA.
Serena M GrahamDepartment of Biology, Colby College, Waterville, Maine, USA.
David R AngeliniDepartment of Biology, Colby College, Waterville, Maine, USA.
Emily L ShawDepartment of Biology, Colby College, Waterville, Maine, USA.
Colby College · US

Funding

The Maine Biomedical Research Network (INBRE)P20GM103423 · NIGMS · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI Dustin Lynn Updike · 2012 to 2026
$60.0M
Investigating Regulation of Integral Membrane Protein Cofactor Biosynthesis usingR15GM094735 · NIGMS · LAWRENCE UNIVERSITY · PI PECK, RONALD F · 2011 to 2011
$289k
NIGMS NIH HHS P20 GM103423NIGMS NIH HHS R15 GM094735
6 · The paper itself

Abstract

Halophilic archaea often inhabit environments with limited oxygen, and many produce ion-pumping rhodopsin complexes that allow them to maintain electrochemical gradients when aerobic respiration is inhibited. Rhodopsins require a protein, an opsin, and an organic cofactor, retinal. We previously demonstrated that in

Indexed as

ArchaeaBacteriorhodopsinsCarotenoidsCloning, MolecularColorimetryGene ExpressionHaloarculaHaloferax volcaniiRecombinant ProteinsRetinaldehydebacterio-opsinBacteriorhodopsinsbacterioruberinCarotenoidsRecombinant ProteinsRetinaldehydeC50 carotenoidcarotenoid biosynthesiscofactor biosynthesismembrane protein biogenesismicrobial rhodopsinproteorhodopsinUbiA prenyltransferase

Identifiers

PMID28784816
PMCPMC5626960
OpenAlexW2742746346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.