Evidence map›Paper›PMID 28784758›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis.

Liang Xu, Wei Wang, Jiabin Wu, Ji Hyun Shin, Pengcheng Wang, Ilona Christy Unarta, Jenny Chong, Yinsheng Wang, Dong Wang

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. DNA lesion bypass and the stochastic dynamics of transcription-coupled repair.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Human DNA Mutations and their Impact on Genetic Disorders.Recent patents on biotechnology · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Metabolic Activation and DNA Interactions of CarcinogenicInternational journal of molecular sciences · 2022
    Review
  12. Review
  13. Article
  14. Review
  15. The complexity and regulation of repair of alkylation damage to nucleic acids.Critical reviews in biochemistry and molecular biology · 2021
    Review
  16. Article
  17. Review
  18. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Liang XuDivision of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0625.
Wei WangDivision of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0625.
Jiabin WuEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521-0403.
Ji Hyun ShinDivision of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0625.
Pengcheng WangDepartment of Chemistry, University of California, Riverside, CA 92521-0403.
Ilona Christy UnartaDepartment of Chemistry, The Hong Kong University of Science and Technology, Hong Kong, China.
Jenny ChongDivision of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0625.
Yinsheng WangEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521-0403; yinsheng.wang@ucr.edu dongwang@ucsd.edu.
Dong WangDivision of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093-0625; yinsheng.wang@ucr.edu dongwang@ucsd.edu.

Funding

Molecular Mechanisms for DNA Damage Processing by Transcription MachineryR01GM102362 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WANG, DONG · 2013 to 2025
$5.6M
Repair and Biological Consequences of Alkylated Thymidine LesionsR01ES025121 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2015 to 2019
$2.2M
NIEHS NIH HHS R01 ES025121NIGMS NIH HHS R01 GM102362
6 · The paper itself

Abstract

Alkylated DNA lesions, induced by both exogenous chemical agents and endogenous metabolites, interfere with the efficiency and accuracy of DNA replication and transcription. However, the molecular mechanisms of DNA alkylation-induced transcriptional stalling and mutagenesis remain unknown. In this study, we systematically investigated how RNA polymerase II (pol II) recognizes and bypasses regioisomeric

Indexed as

Transcription, GeneticAlkylationDNADNA RepairDNA ReplicationHumansMutagenesisRNA Polymerase IISaccharomyces cerevisiaeDNARNA Polymerase IIDNA alkylationRNA polymerase IItranscriptiontranscriptional lesion bypasstranscriptional mutagenesis

Identifiers

PMID28784758
PMCPMC5576830

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.