Evidence map›Paper›PMID 28784141›Full record

ArticleVirology journal2017

Association of the tandem polymorphisms (rs148314165, rs200820567) in TNFAIP3 with chronic hepatitis B virus infection in Chinese Han population.

Na Li, Ying Shi, Pingping Zhang, Jiao Sang, Fang Li, Huan Deng, Yi Lv, Qunying Han, Zhengwen Liu

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Na LiDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China.
Ying ShiMaternal and Children Health Hospital of Tongchuan, Tongchuan, Shaanxi, 727000, China.
Pingping ZhangDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China.
Jiao SangDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China.
Fang LiDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China.
Huan DengDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China.
Yi LvDepartment of Hepatobiliary Surgery, First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, China.
Qunying HanDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China. hanqunying@medmail.com.cn.
Zhengwen LiuDepartment of Infectious Diseases, First Affiliated Hospital of Xi'an Jiaotong University, 277 Yanta West Road, Xi' an, Shaanxi Province, 710061, China. liuzhengwen@medmail.com.cn.
First Affiliated Hospital of Xi'an Jiaotong University · CNXi'an Jiaotong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChronic hepatitis B virus (HBV) infection remains an important public health issue. A20, a ubiquitin-editing protein encoded by tumor necrosis factor alpha-inducible protein 3 (TNFAIP3) gene, is complicated in HBV infection and liver injury. The tandem polymorphisms (rs148314165, rs200820567), deletion T followed by a T to A transversion and collectively referred to as TT > A in TNFAIP3, may attenuate A20 expression.

methodsThe rs148314165 and rs200820567 polymorphisms were examined using PCR amplification followed by direct sequencing in 419 patients with chronic HBV infection, 77 HBV infection resolvers and 175 healthy controls of Chinese Han ethnicity.

resultsThe genotypes and alleles of rs148314165 and rs200820567 polymorphisms determined and the haplotypes constructed were consistently identical, confirming the reliable determination of the TT > A variant. The genotypes of rs148314165 and rs200820567 in HBV patients, HBV infection resolvers and healthy controls are in Hardy-Weinberg equilibrium (P > 0. 05). The patients with chronic HBV infection had higher frequency of TT > A variant than healthy controls (6.6% vs. 3.4%; OR, 1.979; 95% CI, 1.046-3.742; P = 0.033). The frequency of TT > A variant between patients with chronic hepatitis, liver cirrhosis, and hepatocellular carcinoma had no significant differences.

conclusionsThe TT > A variant of TNFAIP3 may be associated with the susceptibility of chronic HBV infection but not the clinical diseases. Studies in large sample size of HBV patient and control populations are required to further clarify the role of this important variant in chronic HBV infection and the disease progression related to the infection.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdolescentAdultAgedAsian PeopleFemaleHaplotypesHepatitis B, ChronicHepatitis B virusHumansMaleMiddle AgedPolymerase Chain ReactionSequence Analysis, DNATumor Necrosis Factor alpha-Induced Protein 3TNFAIP3 protein, humanTumor Necrosis Factor alpha-Induced Protein 3Clinical diseaseHepatitis B virusPolymorphismSusceptibilityTNFAIP3

Identifiers

PMID28784141
PMCPMC5547518
OpenAlexW2744865144

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.