Evidence map›Paper›PMID 28783747›Full record

ArticlePloS one2017

Comprehensive investigation of CASK mutations and other genetic etiologies in 41 patients with intellectual disability and microcephaly with pontine and cerebellar hypoplasia (MICPCH).

Shin Hayashi, Daniela Tiaki Uehara, Kousuke Tanimoto, Seiji Mizuno, Yasutsugu Chinen, Shinobu Fukumura, Jun-Ichi Takanashi, Hitoshi Osaka, Nobuhiko Okamoto, Johji Inazawa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 2 pooled it
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 2 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. The neurodevelopmental spectrum of CASK-related disorder.Journal of neurodevelopmental disorders · 2025
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. CASK hypomorph mice display cone photoreceptor dysfunction.bioRxiv : the preprint server for biology · 2026
    Article
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  8. Review
  9. Article
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  15. Case report: A newFrontiers in genetics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

Shin HayashiDepartment of Molecular Cytogenetics, Medical Research Institute and Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.ORCID http://orcid.org/0000-0002-0644-5890
Daniela Tiaki UeharaDepartment of Molecular Cytogenetics, Medical Research Institute and Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Kousuke TanimotoDepartment of Molecular Cytogenetics, Medical Research Institute and Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Seiji MizunoDepartment of Pediatrics, Central Hospital, Aichi Human Service Center, Kasugai, Japan.
Yasutsugu ChinenDepartment of Pediatrics, University of the Ryukyus School of Medicine, Nishihara, Japan.
Shinobu FukumuraDepartment of Pediatrics, Sapporo Medical University School of Medicine, Sapporo, Japan.
Jun-Ichi TakanashiDepartment of Pediatrics, Tokyo Women's Medical University Yachiyo Medical Center, Yachiyo, Japan.ORCID http://orcid.org/0000-0002-1147-1938
Hitoshi OsakaDepartment of Pediatrics, Jichi Medical School, Tochigi, Japan.
Nobuhiko OkamotoDepartment of Medical Genetics, Osaka Women's and Children's Hospital, Osaka, Japan.
Johji InazawaDepartment of Molecular Cytogenetics, Medical Research Institute and Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Tokyo Medical and Dental University · JPAichi Human Service Center · JPJichi Medical University · JPOsaka Women's and Children's Hospital · JPSapporo Medical University · JPTokyo Women's Medical University · JPUniversity of the Ryukyus · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CASK gene (Xp11.4) is highly expressed in the mammalian nervous system and plays several roles in neural development and synaptic function. Loss-of-function mutations of CASK are associated with intellectual disability and microcephaly with pontine and cerebellar hypoplasia (MICPCH), especially in females. Here, we present a comprehensive investigation of 41 MICPCH patients, analyzed by mutational search of CASK and screening of candidate genes using an SNP array, targeted resequencing and whole-exome sequencing (WES). In total, we identified causative or candidate genomic aberrations in 37 of the 41 cases (90.2%). CASK aberrations including a rare mosaic mutation in a male patient, were found in 32 cases, and a mutation in ITPR1, another known gene in which mutations are causative for MICPCH, was found in one case. We also found aberrations involving genes other than CASK, such as HDAC2, MARCKS, and possibly HS3ST5, which may be associated with MICPCH. Moreover, the targeted resequencing screening detected heterozygous variants in RELN in two cases, of uncertain pathogenicity, and WES analysis suggested that concurrent mutations of both DYNC1H1 and DCTN1 in one case could lead to MICPCH. Our results not only identified the etiology of MICPCH in nearly all the investigated patients but also suggest that MICPCH is a genetically heterogeneous condition, in which CASK inactivating mutations appear to account for the majority of cases.

Indexed as

AdolescentAnimalsCerebellumChildChild, PreschoolCytoplasmic DyneinsDevelopmental DisabilitiesDynactin ComplexFemaleGenetic Predisposition to DiseaseGuanylate KinasesHistone Deacetylase 2HumansInfantInositol 1,4,5-Trisphosphate ReceptorsIntellectual DisabilityCASK kinasesCytoplasmic DyneinsDCTN1 protein, humanDynactin ComplexDYNC1H1 protein, humanGuanylate KinasesHDAC2 protein, humanHistone Deacetylase 2Inositol 1,4,5-Trisphosphate ReceptorsIntracellular Signaling Peptides and ProteinsITPR1 protein, humanMARCKS protein, humanMembrane ProteinsMyristoylated Alanine-Rich C Kinase SubstrateReelin ProteinRELN protein, human

Identifiers

PMID28783747
PMCPMC5546575
OpenAlexW2742474086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.