Evidence map›Paper›PMID 28783426›Full record

ArticleRNA biology2017

Characterization of the piRNA pathway during development of the sea anemone Nematostella vectensis.

Daniela Praher, Bob Zimmermann, Grigory Genikhovich, Yaara Columbus-Shenkar, Vengamanaidu Modepalli, Reuven Aharoni, Yehu Moran, Ulrich Technau

Abstract read
In one paragraph

Article in RNA biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. PIWI proteins and piRNAs: key regulators of stem cell biology.Frontiers in cell and developmental biology · 2025
    Review
  9. Article
  10. Article
  11. Science advances · 2024
    Article
  12. Article
  13. The Ancient Origin and Function of Germline Cysts.Results and problems in cell differentiation · 2024
    Article
  14. Article
  15. Small RNAs in Cnidaria: A review.Evolutionary applications · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniela Prahera Department of Molecular Evolution and Development; Centre of Organismal Systems Biology, Faculty of Life Sciences , University of Vienna ; Althanstrasse 14, Wien , Austria.
Bob Zimmermanna Department of Molecular Evolution and Development; Centre of Organismal Systems Biology, Faculty of Life Sciences , University of Vienna ; Althanstrasse 14, Wien , Austria.
Grigory Genikhovicha Department of Molecular Evolution and Development; Centre of Organismal Systems Biology, Faculty of Life Sciences , University of Vienna ; Althanstrasse 14, Wien , Austria.
Yaara Columbus-Shenkarb Department of Ecology, Evolution and Behavior; Alexander Silberman Institute of Life Sciences , The Hebrew University of Jerusalem ; Givat Ram , Jerusalem , Israel.
Vengamanaidu Modepallib Department of Ecology, Evolution and Behavior; Alexander Silberman Institute of Life Sciences , The Hebrew University of Jerusalem ; Givat Ram , Jerusalem , Israel.
Reuven Aharonib Department of Ecology, Evolution and Behavior; Alexander Silberman Institute of Life Sciences , The Hebrew University of Jerusalem ; Givat Ram , Jerusalem , Israel.
Yehu Moranb Department of Ecology, Evolution and Behavior; Alexander Silberman Institute of Life Sciences , The Hebrew University of Jerusalem ; Givat Ram , Jerusalem , Israel.ORCID 0000-0001-9928-9294
Ulrich Technaua Department of Molecular Evolution and Development; Centre of Organismal Systems Biology, Faculty of Life Sciences , University of Vienna ; Althanstrasse 14, Wien , Austria.ORCID 0000-0003-4472-8258

Funding

Austrian Science Fund FWF P 22618Austrian Science Fund FWF P 24858European Research Council 637456
6 · The paper itself

Abstract

PIWI-interacting RNAs (piRNAs) and associated proteins comprise a conserved pathway for silencing transposons in metazoan germlines. piRNA pathway components are also expressed in multipotent somatic stem cells in various organisms. piRNA functions have been extensively explored in bilaterian model systems, however, comprehensive studies in non-bilaterian phyla remain limited. Here we investigate the piRNA pathway during the development of Nematostella vectensis, a well-established model system belonging to Cnidaria, the sister group to Bilateria. To date, no population of somatic stem cells has been identified in this organism, despite its long life-span and regenerative capacities that require a constant cell-renewal. We show that Nematostella piRNA pathway components are broadly expressed in early developmental stages, while piRNAs themselves show differential expression, suggesting specific developmental roles of distinct piRNA families. In adults, piRNA associated proteins are enriched in the germline but also expressed in somatic cells, indicating putative stem cell properties. Furthermore, we provide experimental evidence that Nematostella piRNAs cleave transposable elements as well as protein-coding genes. Our results demonstrate that somatic expression of piRNA associated proteins as well as the roles of piRNAs in transposon repression and gene regulation are likely ancestral features that evolved before the split between Cnidaria and Bilateria.

Indexed as

AnimalsArgonaute ProteinsBiological EvolutionDEAD-box RNA HelicasesGene Expression ProfilingGene Expression RegulationGerm CellsOpen Reading FramesPhylogenyRNA InterferenceRNA, MessengerRNA, Small InterferingSea AnemonesArgonaute ProteinsDEAD-box RNA HelicasesRNA, MessengerRNA, Small InterferingCnidariaevolutionNematostella vectensispiRNAPiwiVasa

Identifiers

PMID28783426
PMCPMC5731801

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.