Evidence map›Paper›PMID 28783377›Full record

ArticleAmerican journal of respiratory and critical care medicine2017

Extracellular Mitochondrial DNA Is Generated by Fibroblasts and Predicts Death in Idiopathic Pulmonary Fibrosis.

Changwan Ryu, Huanxing Sun, Mridu Gulati, Jose D Herazo-Maya, Yonglin Chen, Awo Osafo-Addo, Caitlin Brandsdorfer, Julia Winkler, Christina Blaul, Jaden Faunce and 18 more

Abstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 170 citations in OpenAlex.

  1. Advances in metabolic reprogramming of pulmonary fibrosis.Chinese medical journal pulmonary and critical care medicine · 2026
    Review
  2. Review
  3. Review
  4. Review
  5. Hallmarks of the ageing lung: 10 years later.The European respiratory journal · 2026
    Review
  6. Article
  7. Review
  8. Precision Medicine Advances in Chronic Lung Diseases.International journal of molecular sciences · 2025
    Article
  9. Article
  10. Mechanisms and markers of lung ageing in health and disease.European respiratory review : an official journal of the European Respiratory Society · 2025
    Review
  11. Article
  12. Review
  13. Mitochondrial DNA signals driving immune responses: Why, How, Where?Cell communication and signaling : CCS · 2025
    Review
  14. Review
  15. Review
  16. MitochondrialInternational journal of molecular sciences · 2025
    Article
  17. Review
  18. Article
  19. Article
  20. Immunobiology of pulmonary fibrosis.Frontiers in immunology · 2025
    Review

58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 6 institutions in 2 countries.

Changwan Ryu1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Huanxing Sun1 Section of Pulmonary, Critical Care, and Sleep Medicine.ORCID 0000-0003-2397-4652
Mridu Gulati1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Jose D Herazo-Maya1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Yonglin Chen2 Yale University School of Bioengineering, New Haven, Connecticut.
Awo Osafo-Addo1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Caitlin Brandsdorfer1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Julia Winkler1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Christina Blaul1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Jaden Faunce1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Hongyi Pan1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Tony Woolard1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Argyrios Tzouvelekis1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Danielle E Antin-Ozerkis1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Jonathan T Puchalski1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Martin Slade1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Anjelica L Gonzalez2 Yale University School of Bioengineering, New Haven, Connecticut.
Daniel F Bogenhagen3 Department of Pharmacology and.
Varvara Kirillov4 Department of Pathology, Stony Brook University School of Medicine, Stony Brook, New York.
Carol Feghali-Bostwick5 Department of Medicine, Medical University of South Carolina, Charleston, South Carolina; and.
Kevin Gibson6 Dorothy P. and Richard P. Simmons Center for Interstitial Lung Disease, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.
Kathleen Lindell6 Dorothy P. and Richard P. Simmons Center for Interstitial Lung Disease, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.
Raimund I Herzog7 Section of Endocrinology and Metabolism, and.
Charles S Dela Cruz1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Wajahat Mehal8 Section of Digestive Diseases, Yale University School of Medicine, New Haven, Connecticut.
Naftali Kaminski1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Erica L Herzog1 Section of Pulmonary, Critical Care, and Sleep Medicine.
Glenda Trujillo4 Department of Pathology, Stony Brook University School of Medicine, Stony Brook, New York.ORCID 0000-0002-6061-5264
SleepMed · USYale University · USStony Brook School · USUniversity of Pittsburgh Medical Center · USMax Planck Institute for Metabolism Research · DEMedical University of South Carolina · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Yale Diabetes Research CenterP30DK045735 · NIDDK · YALE UNIVERSITY · PI Kevan C Herold, GERALD I SHULMAN · 1993 to 2026
$44.0M
Training Translational Lung Biology and PathobiologyT32HL007778 · NHLBI · YALE UNIVERSITY · PI Erica L Herzog, NAFTALI KAMINSKI · 1994 to 2026
$14.4M
Genomic Analysis of Tissue and Cellular Heterogeneity in IPFR01HL127349 · NHLBI · YALE UNIVERSITY · PI BENOS, PANAGIOTIS V, KAMINSKI, NAFTALI · 2015 to 2025
$5.9M
Mir-29 mimicry as a therapy for pulmonary fibrosisUH3HL123886 · NHLBI · YALE UNIVERSITY · PI KAMINSKI, NAFTALI · 2016 to 2018
$4.5M
Regulation of Brain Glucose Metabolism in Type 1 DiabetesR01DK101984 · NIDDK · YALE UNIVERSITY · PI HERZOG, RAIMUND INGO · 2014 to 2023
$3.8M
Novel Immunologic Effects of Semaphorin 7a in IPFR01HL109233 · NHLBI · YALE UNIVERSITY · PI HERZOG, ERICA L · 2011 to 2019
$3.7M
Alveolar DevMAPU01HL122626 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AMBALAVANAN, NAMASIVAYAM, HAGOOD, JAMES S. · 2014 to 2018
$3.7M
Rheumatic Diseases Research Core CentersP30AR061271 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WHITFIELD, MICHAEL L · 2011 to 2015
$3.1M
Host-Pneumococcal Interaction in the LungR01HL126094 · NHLBI · YALE UNIVERSITY · PI DELA CRUZ, CHARLES S · 2015 to 2019
$2.1M
Targeting DAMPs in Alcoholic HepatitisU01AA021912 · NIAAA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MEHAL, WAJAHAT ZAFAR, SCHWABE, ROBERT F. · 2013 to 2017
$1.9M
BLRD VA I01 BX003259NCATS NIH HHS UL1 TR000005NCATS NIH HHS UL1 TR001863NHLBI NIH HHS K08 HL103770NHLBI NIH HHS R01 HL109233NHLBI NIH HHS R01 HL125850NHLBI NIH HHS R01 HL126094NHLBI NIH HHS R01 HL127349NHLBI NIH HHS T32 HL007778NHLBI NIH HHS U01 HL112702NHLBI NIH HHS U01 HL122626NHLBI NIH HHS UH3 HL123886NIAAA NIH HHS U01 AA021912NIAMS NIH HHS K24 AR060297NIAMS NIH HHS P30 AR061271NIDDK NIH HHS P30 DK045735NIDDK NIH HHS R01 DK101984NIDDK NIH HHS R56 DK076674NIGMS NIH HHS R01 GM112790NIH HHS S10 OD016405
6 · The paper itself

Abstract

rationaleIdiopathic pulmonary fibrosis (IPF) involves the accumulation of α-smooth muscle actin-expressing myofibroblasts arising from interactions with soluble mediators such as transforming growth factor-β1 (TGF-β1) and mechanical influences such as local tissue stiffness. Whereas IPF fibroblasts are enriched for aerobic glycolysis and innate immune receptor activation, innate immune ligands related to mitochondrial injury, such as extracellular mitochondrial DNA (mtDNA), have not been identified in IPF.

objectivesWe aimed to define an association between mtDNA and fibroblast responses in IPF.

methodsWe evaluated the response of normal human lung fibroblasts (NHLFs) to stimulation with mtDNA and determined whether the glycolytic reprogramming that occurs in response to TGF-β1 stimulation and direct contact with stiff substrates, and spontaneously in IPF fibroblasts, is associated with excessive levels of mtDNA. We measured mtDNA concentrations in bronchoalveolar lavage (BAL) from subjects with and without IPF, as well as in plasma samples from two longitudinal IPF cohorts and demographically matched control subjects. MEASUREMENTS AND MAIN

resultsExposure to mtDNA augments α-smooth muscle actin expression in NHLFs. The metabolic changes in NHLFs that are induced by interactions with TGF-β1 or stiff hydrogels are accompanied by the accumulation of extracellular mtDNA. These findings replicate the spontaneous phenotype of IPF fibroblasts. mtDNA concentrations are increased in IPF BAL and plasma, and in the latter compartment, they display robust associations with disease progression and reduced event-free survival.

conclusionsThese findings demonstrate a previously unrecognized and highly novel connection between metabolic reprogramming, mtDNA, fibroblast activation, and clinical outcomes that provides new insight into IPF.

Indexed as

AgedDisease-Free SurvivalDNA, MitochondrialFemaleFibroblastsHumansIdiopathic Pulmonary FibrosisMaleDNA, Mitochondrialbiomarkersinterstitial lung diseasemechanotransductionmitochondria

Identifiers

PMID28783377
PMCPMC5754440
OpenAlexW2745223933

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.