Evidence map›Paper›PMID 28783162›Full record

ArticleNature genetics2017

Classification of common human diseases derived from shared genetic and environmental determinants.

Kanix Wang, Hallie Gaitsch, Hoifung Poon, Nancy J Cox, Andrey Rzhetsky

Registry-linked trialAbstract read
In one paragraph

Article in Nature genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05175651 (Prospective Electronic Polygenic Risk Study - Second Phase), which is not on this map. Cited by 126 papers, 9 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
126citing papers in PubMed, 9 pooled it
20.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05175651 nanot yet recruitingnot on this mapstarted 2023, after this paper: background citation

Prospective Electronic Polygenic Risk Study - Second Phase

TypeinterventionalSponsorScripps Translational Science InstituteRan2023 to 2027Enrolled10,000ConditionsCoronary Artery Disease, GlaucomaArmsGenetic risk assessment
3 · Its place in the literature

Who cites it

126 citing papers in PubMed, 9 syntheses or guidelines pooled it, 255 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Uptake of Polygenic Risk Testing for Glaucoma in Unaffected Individuals.Translational vision science & technology · 2026
    Article
  17. Review
  18. Article
  19. Review
  20. Article

66 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Kanix WangCommittee on Genetics, Genomics, and Systems Biology, University of Chicago, Chicago, Illinois, USA.
Hallie GaitschInstitute of Genomics and Systems Biology, University of Chicago, Chicago, Illinois, USA.
Hoifung PoonMicrosoft Research, Redmond, Washington, USA.
Nancy J CoxVanderbilt Genetics Institute, Vanderbilt University, School of Medicine, Nashville, Tennessee, USA.
Andrey RzhetskyInstitute of Genomics and Systems Biology, University of Chicago, Chicago, Illinois, USA.ORCID http://orcid.org/0000-0001-6959-7405
University of Chicago · USMicrosoft (United States) · USVanderbilt University · US

Funding

Modeling the temporal succession of phenotypes & environnnental cuesP50MH094267 · NIMH · UNIVERSITY OF CHICAGO · PI RZHETSKY, ANDREY · 2011 to 2015
$10.2M
MAPGen Knowledge Base (MAPGenKB) and Coordination CenterU01HL108634 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ZHOU, XIANGHONG JASMINE · 2011 to 2015
$5.3M
Mendelian Disease - Asthma Comorbidity to Find Subgroup-Specific Asthma GenesR01HL122712 · NHLBI · UNIVERSITY OF CHICAGO · PI OBER, CAROLE, RZHETSKY, ANDREY · 2015 to 2018
$3.1M
NHLBI NIH HHS R01 HL122712NHLBI NIH HHS U01 HL108634NIMH NIH HHS P50 MH094267
6 · The paper itself

Abstract

In this study, we used insurance claims for over one-third of the entire US population to create a subset of 128,989 families (481,657 unique individuals). We then used these data to (i) estimate the heritability and familial environmental patterns of 149 diseases and (ii) infer the genetic and environmental correlations for disease pairs from a set of 29 complex diseases. The majority (52 of 65) of our study's heritability estimates matched earlier reports, and 84 of our estimates appear to have been obtained for the first time. We used correlation matrices to compute environmental and genetic disease classifications and corresponding reliability measures. Among unexpected observations, we found that migraine, typically classified as a disease of the central nervous system, appeared to be most genetically similar to irritable bowel syndrome and most environmentally similar to cystitis and urethritis, all of which are inflammatory diseases.

Indexed as

EnvironmentCystitisDiseaseFemaleGenetic Predisposition to DiseaseHumansInflammationInheritance PatternsInsurance Claim ReportingIrritable Bowel SyndromeLinear ModelsMaleMigraine DisordersMultivariate AnalysisPedigreeRisk Factors

Identifiers

PMID28783162
PMCPMC5577363
OpenAlexW2745008762

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.