Evidence map›Paper›PMID 28781344›Full record

ArticleMicrobes and environments2017

Spatially Resolved Distribution of Fe Species around Microbes at the Submicron Scale in Natural Bacteriogenic Iron Oxides.

Hiroki Suga, Sakiko Kikuchi, Yasuo Takeichi, Chihiro Miyamoto, Masaaki Miyahara, Satoshi Mitsunobu, Takuji Ohigashi, Kazuhiko Mase, Kanta Ono, Yoshio Takahashi

Open access · diamondAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbes and environments, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 8 institutions in 2 countries.

Hiroki SugaDepartment of Earth and Planetary Systems Science, Graduate School of Science (DEPSS), Hiroshima University.
Sakiko KikuchiProject Team for Development of New-Generation Research Protocol for Submarine Resources, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Yasuo TakeichiInstitute of Materials Structure Science, High-Energy Accelerator Research Organization (KEK).
Chihiro MiyamotoDepartment of Earth and Planetary Science, Graduate School of Science, The University of Tokyo.
Masaaki MiyaharaDepartment of Earth and Planetary Systems Science, Graduate School of Science (DEPSS), Hiroshima University.
Satoshi MitsunobuDepartment of Environmental Conservation, Graduate school of Agriculture, Ehime University.
Takuji OhigashiUVSOR facility, Institute for Molecular Science.
Kazuhiko MaseInstitute of Materials Structure Science, High-Energy Accelerator Research Organization (KEK).
Kanta OnoInstitute of Materials Structure Science, High-Energy Accelerator Research Organization (KEK).
Yoshio TakahashiDepartment of Earth and Planetary Systems Science, Graduate School of Science (DEPSS), Hiroshima University.
High Energy Accelerator Research Organization · JPEhime University · JPHiroshima University · JPInstitute for Molecular Science · JPJapan Agency for Marine-Earth Science and Technology · JPPlanetary Science Institute · USPlanetary Systems (United States) · USThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural bacteriogenic iron oxides (BIOS) were investigated using local-analyzable synchrotron-based scanning transmission X-ray microscopy (STXM) with a submicron-scale resolution. Cell, cell sheath interface (EPS), and sheath in the BIOS were clearly depicted using C-, N-, and O- near edge X-ray absorption fine structure (NEXAFS) obtained through STXM measurements. Fe-NEXAFS obtained from different regions of BIOS indicated that the most dominant iron mineral species was ferrihydrite. Fe(II)- and/or Fe(III)-acidic polysaccharides accompanied ferrihydrite near the cell and EPS regions. Our STXM/NEXAFS analysis showed that Fe species change continuously between the cell, EPS, and sheath under several 10-nm scales.

Indexed as

BacteriaFerric CompoundsIronSynchrotronsX-Ray Absorption SpectroscopyFerric Compoundsferric oxideIronbacteriogenic/biogenic iron oxides (BIOS)iron oxidesiron speciationnear edge X-ray absorption fine structure (NEXAFS)scanning transmission X-ray microscopy (STXM)

Identifiers

PMID28781344
PMCPMC5606699
OpenAlexW2744294772

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.