Evidence map›Paper›PMID 28779025›Full record

ArticleGut2018

Genetic association analysis identifies variants associated with disease progression in primary sclerosing cholangitis.

Rudi Alberts, Elisabeth M G de Vries, Elizabeth C Goode, Xiaojun Jiang, Fotis Sampaziotis, Krista Rombouts, Katrin Böttcher, Trine Folseraas, Tobias J Weismüller, Andrew L Mason and 65 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Gut, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 57 citations in OpenAlex.

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  16. Monomeric/dimeric forms of Fgf15/FGF19 show differential activity in hepatocyte proliferation and metabolic function.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  17. Cholangiocarcinoma 2020: the next horizon in mechanisms and management.Nature reviews. Gastroenterology & hepatology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

75 authors at 20 institutions in 14 countries.

Rudi Alberts *Department of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Elisabeth M G de Vries *Department of Gastroenterology and Hepatology, Academic Medical Center, Amsterdam, The Netherlands.
Elizabeth C GoodeNorwich Medical School, Faculty of Medicine and Health Sciences, University of East Anglia, Norwich, UK.
Xiaojun JiangNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Fotis SampaziotisDepartment of Surgery, Wellcome Trust-Medical Research Council Stem Cell Institute, Anne McLaren Laboratory, University of Cambridge, Cambridge, UK.
Krista RomboutsInstitute for Liver and Digestive Health, University College London, Royal Free Hospital, London, UK.
Katrin BöttcherInstitute for Liver and Digestive Health, University College London, Royal Free Hospital, London, UK.
Trine FolseraasNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Tobias J WeismüllerDepartment of Gastroenterology Hepatology and Endocrinology, Hannover Medical School, Hannover, Germany.
Andrew L MasonDivision of Gastroenterology and Hepatology, University of Alberta, Edmonton, Alberta, Canada.
Weiwei WangDivision of Gastroenterology and Hepatology, University of Alberta, Edmonton, Alberta, Canada.
Graeme AlexanderDepartment of Medicine, Division of Hepatology, University of Cambridge, Cambridge, UK.
Domenico AlvaroDepartment of Clinical Medicine, Division of Gastroenterology, Sapienza University of Rome, Rome, Italy.
Annika BergquistCenter for Digestive Diseases, Karolinska University Hospital, Karolinska Institutet, Stockholm, Sweden.
Niklas K BjörkströmDepartment of Medicine Huddinge, Center for Infectious Medicine, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden.
Ulrich BeuersDepartment of Gastroenterology and Hepatology, Academic Medical Center, Amsterdam, The Netherlands.
Einar BjörnssonDepartment of Internal Medicine, Division of Gastroenterology and Hepatology, Landspitali University Hospital, Reykjavik, Iceland.
Kirsten Muri BobergNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Christopher L BowlusDivision of Gastroenterology and Hepatology, University of California Davis, Davis, California, USA.
Maria C BragazziSapienza University of Rome, Medico-Surgical Sciences and Biotechnologies, Rome, Italy.
Marco CarboneDepartment of Medicine and Surgery, Program for Autoimmune Liver Diseases, International Center for Digestive Health, University of Milan-Bicocca, Milan, Italy.
Olivier ChazouillèresDepartment of Hepatology, AP-HP, Hôpital Saint Antoine, Paris, France.
Angela CheungGeneral Internal Medicine, University Health Network, Toronto General Hospital, Toronto, Canada.
Georgios DalekosDepartment of Medicine and Research Laboratory of Internal Medicine, Medical School, University of Thessaly, Larissa, Greece.
John EatonDivision of Gastroenterology and Hepatology, Mayo Clinic Minnesota, Rochester, Minnesota, USA.
Bertus EksteenDepartment of Medicine, Snyder Institute of Chronic Diseases, University of Calgary, Calgary, Canada.
David EllinghausInstitute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany.
Martti FärkkiläDepartment of Medicine, Division of Gastroenterology, Helsinki University Hospital, Helsinki, Finland.
Eleonora A M FestenDepartment of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Annarosa FloreaniDepartment of Surgical Oncological and Gastroenterological Sciences, University of Padova, Padova, Italy.
Irene FranceschetDepartment of Surgery Oncology and Gastroenterology, University of Padova, Padova, Italy.
Daniel Nils GotthardtDepartment of Medicine, University Hospital of Heidelberg, Heidelberg, Germany.
Gideon M HirschfieldCentre for Liver Research, NIHR Biomedical Research Unit, University of Birmingham, Birmingham, UK.
B van HoekDepartment of Gastroenterology and Hepatology, Leiden University Medical Centre, Leiden, The Netherlands.
Kristian HolmNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Simon HohenesterDepartment of Medicine II, Liver Center Munich, University of Munich, Munich, Germany.
Johannes Roksund HovNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Floris ImhannDepartment of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Pietro InvernizziDepartment of Medicine and Surgery, Program for Autoimmune Liver Diseases, International Center for Digestive Health, University of Milan-Bicocca, Milan, Italy.
Brian D JuranDivision of Gastroenterology and Hepatology, Mayo Clinic Minnesota, Rochester, Minnesota, USA.
Henrike LenzenDepartment of Gastroenterology Hepatology and Endocrinology, Hannover Medical School, Hannover, Germany.
Wolfgang LiebPopgen Biobank, University Hospital Schleswig-Holstein, Christian-Albrechts-University, Kiel, Germany.
Jimmy Z LiuWellcome Trust Genome Campus, Wellcome Trust Sanger Institute, Cambridge, UK.
Hanns-Ulrich MarschallDepartment of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, Gothenburg, Sweden.
Marco MarzioniDepartment of Gastroenterology, Università Politecnica delle Marche, Ospedali Riuniti University Hospital, Ancona, Italy.
Espen MelumNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Piotr MilkiewiczLiver and Internal Medicine Unit, Medical University of Warsaw, Warsaw, Poland.
Tobias MüllerDepartment of Internal Medicine Hepatology and Gastroenterology, Charité Universitätsmedizin Berlin, Campus Virchow Klinikum, Berlin, Germany.
Albert ParesLiver Unit Hospital Clinic, IDIBAPS, CIBERehd, University of Barcelona, Barcelona, Spain.
Christian RuppDepartment of Internal Medicine IV, University Hospital of Heidelberg, Heidelberg, Germany.
Christian RustDepartment of Medicine I, Krankenhaus Barmherzige Brüder, Munich, Germany.
Richard N SandfordAcademic Department of Medical Genetics, University of Cambridge, Cambridge, UK.
Christoph Schramm1st Department of Medicine, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Stefan SchreiberInstitute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany.
Erik SchrumpfResearch Institute of Internal Medicine, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Mark S SilverbergInflammatory Bowel Disease (IBD) Group Zane Cohen Centre for Digestive Diseases, Mount Sinai Hospital Toronto, Ontario, Canada.
Brijesh SrivastavaAcademic Department of Medical Genetics, University of Cambridge, Cambridge, UK.
Martina SterneckDepartment of Hepatobiliary Surgery and Transplantation, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Andreas Teufel1st Department of Medicine, University of Mainz, Mainz, Germany.
Ludovic VallierDepartment of Surgery, Wellcome Trust-Medical Research Council Stem Cell Institute, Anne McLaren Laboratory, University of Cambridge, Cambridge, UK.
Joanne VerheijDepartment of Pathology, Academic Medical Center, Amsterdam, The Netherlands.
Arnau Vich VilaDepartment of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Boudewijn de VriesDepartment of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Kalliopi ZachouDepartment of Internal Medicine, University of Thessaly, Larissa, Greece.
International PSC Study Group, The UK PSC Consortium
Roger W ChapmanDepartment of Hepatology, John Radcliffe University Hospitals NHS Trust, Cambridge, UK.
Michael P MannsDepartment of Gastroenterology Hepatology and Endocrinology, Hannover Medical School, Hannover, Germany.
Massimo PinzaniInstitute for Liver and Digestive Health, University College London, Royal Free Hospital, London, UK.
Simon M RushbrookNorwich Medical School, Faculty of Medicine and Health Sciences, University of East Anglia, Norwich, UK.
Konstantinos N LazaridisDivision of Gastroenterology and Hepatology, Mayo Clinic Minnesota, Rochester, Minnesota, USA.
Andre FrankeInstitute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany.
Carl A AndersonWellcome Trust Genome Campus, Wellcome Trust Sanger Institute, Cambridge, UK.
Tom H KarlsenNorwegian PSC Research Center, Division of Cancer Medicine, Surgery and Transplantation, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Cyriel Y PonsioenDepartment of Gastroenterology and Hepatology, Academic Medical Center, Amsterdam, The Netherlands.
Rinse K WeersmaDepartment of Gastroenterology and Hepatology, University of Groningen and University Medical Centre Groningen, Groningen, The Netherlands.
Oslo University Hospital · NOUniversity Medical Center Groningen · NLUniversity of Cambridge · GBAcademic Medical Center · NLMayo Clinic · USMedizinische Hochschule Hannover · DEHeidelberg University · DEKarolinska University Hospital · SESapienza University of Rome · ITUniversität Hamburg · DEUniversity College London · GBUniversity of Alberta · CAUniversity of Milano-Bicocca · ITUniversity of Padua · ITUniversity of Thessaly · GRWellcome Sanger Institute · GBAssistance Publique – Hôpitaux de Paris · FRCentro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas · ESCharité - Universitätsmedizin Berlin · DEHelsinki University Hospital · FI

Funding

PSC Resource Of Genetic Risk, Environment and Synergy Studies (PROGRESS)R01DK084960 · NIDDK · MAYO CLINIC ROCHESTER · PI LAZARIDIS, KONSTANTINOS N · 2010 to 2014
$3.0M
Medical Research Council MC_PC_12009Medical Research Council MR/L016761/1National Centre for the Replacement, Refinement and Reduction of Animals in Research NC/N001540/1NIDDK NIH HHS R01 DK084960
6 · The paper itself

Abstract

objectivePrimary sclerosing cholangitis (PSC) is a genetically complex, inflammatory bile duct disease of largely unknown aetiology often leading to liver transplantation or death. Little is known about the genetic contribution to the severity and progression of PSC. The aim of this study is to identify genetic variants associated with PSC disease progression and development of complications.

designWe collected standardised PSC subphenotypes in a large cohort of 3402 patients with PSC. After quality control, we combined 130 422 single nucleotide polymorphisms of all patients-obtained using the Illumina immunochip-with their disease subphenotypes. Using logistic regression and Cox proportional hazards models, we identified genetic variants associated with binary and time-to-event PSC subphenotypes.

resultsWe identified genetic variant rs853974 to be associated with liver transplant-free survival (p=6.07×10

conclusionWe present a large international PSC cohort, and report genetic loci associated with PSC disease progression. For liver transplant-free survival, we identified a genome-wide significant signal and demonstrated expression of the candidate gene

Indexed as

AdultCholangitis, SclerosingCohort StudiesDisease ProgressionFemaleHumansKaplan-Meier EstimateLogistic ModelsMaleMiddle AgedPolymorphism, Single NucleotideProportional Hazards ModelsR-SpondinsThrombospondinsRSPO3 protein, humanR-SpondinsThrombospondinsgeneticsliver transplantationPrimary sclerosing cholangitis

Identifiers

PMID28779025
PMCPMC5797498
OpenAlexW2744940345

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.