Evidence map›Paper›PMID 28778955›Full record

ArticleThe Plant cell2017

HISTONE DEACETYLASE6 Acts in Concert with Histone Methyltransferases SUVH4, SUVH5, and SUVH6 to Regulate Transposon Silencing.

Chun-Wei Yu, Ready Tai, Shen-Chi Wang, Ping Yang, Ming Luo, Songguang Yang, Kai Cheng, Wen-Chun Wang, Yi-Sheng Cheng, Keqiang Wu

Abstract read
In one paragraph

Article in The Plant cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  17. Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chun-Wei YuInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.ORCID http://orcid.org/0000-0003-1475-5247
Ready TaiInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Shen-Chi WangInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Ping YangKey Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
Ming LuoKey Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
Songguang YangKey Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
Kai ChengKey Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
Wen-Chun WangInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.ORCID http://orcid.org/0000-0003-0923-9889
Yi-Sheng ChengInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.ORCID http://orcid.org/0000-0002-4423-4381
Keqiang WuInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan kewu@ntu.edu.tw.ORCID http://orcid.org/0000-0002-5791-3594

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone deacetylases (HDACs) play important roles in regulating gene expression. In yeast and animals, HDACs act as components of multiprotein complexes that modulate transcription during various biological processes. However, little is known about the interacting proteins of plant HDACs. To identify the plant HDAC complexes and interacting proteins, we developed an optimized workflow using immunopurification coupled to mass spectrometry-based proteomics in

Indexed as

Gene SilencingAmino Acid MotifsAmino Acid SequenceArabidopsisArabidopsis ProteinsChromatin Assembly and DisassemblyChromatography, LiquidConserved SequenceDNA Transposable ElementsFlowersHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesLysineMethyltransferasesArabidopsis ProteinsAT5G63110 protein, ArabidopsisDNA Transposable ElementsHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesLysineMethyltransferasesMutant ProteinsPhosphoserineSUVH4 protein, ArabidopsisSUVH5 protein, ArabidopsisSUVH6 protein, Arabidopsis

Identifiers

PMID28778955
PMCPMC5590490

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.