Evidence map›Paper›PMID 28776372›Full record

ArticleBiochemistry2017

Structural Stability of the Coiled-Coil Domain of Tumor Susceptibility Gene (TSG)-101.

Jordan T White, Dmitri Toptygin, Randy Cohen, Natalie Murphy, Vincent J Hilser

Abstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Structural Relationships to Efficacy for Prazole-Derived Antivirals.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Integrative Modeling and Visualization of Exosomes.The Journal of biocommunication · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jordan T WhiteDepartment of Biology, Johns Hopkins University , 3400 North Charles Street, Baltimore, Maryland 21218, United States.
Dmitri ToptyginDepartment of Biology, Johns Hopkins University , 3400 North Charles Street, Baltimore, Maryland 21218, United States.
Randy CohenDepartment of Biology, Johns Hopkins University , 3400 North Charles Street, Baltimore, Maryland 21218, United States.
Natalie MurphyDepartment of Biology, Johns Hopkins University , 3400 North Charles Street, Baltimore, Maryland 21218, United States.
Vincent J HilserDepartment of Biology, Johns Hopkins University , 3400 North Charles Street, Baltimore, Maryland 21218, United States.ORCID 0000-0002-7173-0073

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
Thermodynamics of Protein FluctuationsR01GM063747 · NIGMS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI HILSER, VINCENT J. · 2001 to 2023
$7.9M
NIGMS NIH HHS R01 GM063747NIGMS NIH HHS T32 GM007231
6 · The paper itself

Abstract

The tumor susceptibility gene-101 coiled coil domain (TSG101cc) is an integral component of the endosomal maturation machinery and cytokinesis, and also interacts with several transcription factors. The TSG101cc has been crystallized as a homotetramer but is known to interact with two of its binding partners as a heterotrimer. To investigate this apparent discrepancy, we examined the solution thermodynamics of the TSG101cc. Here, we use circular dichroism, differential scanning calorimetry, analytical ultracentrifugation, fluorescence, and structural thermodynamic analysis to investigate the structural stability and the unfolding of the TSG101cc. We demonstrate that TSG101cc exists in solution primarily as a tetramer, which unfolds in a two-state manner. Surprisingly, no homodimeric or homotrimeric species were detected. Structural thermodynamic analysis of the homotetrameric structure and comparison with known oligomeric coiled-coils suggests that the TSG101cc homotetramer is comparatively unstable on a per residue basis. Furthermore, the homotrimeric coiled-coil is predicted to be much less stable than the functional heterotrimeric coiled-coil in the endosomal sorting complex required for transport 1 (ESCRT1). These results support a model whereby the tetramer-monomer equilibrium of TSG101 serves as the cellular reservoir of TSG101, which is effectively outcompeted when its binding partners are present and the heteroternary complex can form.

Indexed as

DNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportEscherichia coliHot TemperatureHydrogen-Ion ConcentrationProtein ConformationProtein DomainsProtein UnfoldingTranscription FactorsTsg101 ProteinDNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportTranscription FactorsTsg101 Protein

Identifiers

PMID28776372
PMCPMC5616090

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.